| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02327 |
|---|
| Symbol | |
|---|
| ID | 6778992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2515004 |
|---|
| End bp | 2515573 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642755766 |
|---|
| Product | Pyridoxamine 5-phosphate oxidase-related, FMN-binding protein |
|---|
| Protein accession | YP_002126617 |
|---|
| Protein GI | 196157128 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.437223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATAG CTATGCCCCA GTGGCGACAA GGACTGACAA AAAGTTTGCA TCAAACCCGT
AGCGTACCTG AGAGTCGCTA CTTTCAGCTT GCCTCAGTAG ATAGCAACGG GGTGCCTTAT
TGCCGTACCG TGGTGTTTAG AGGCGTGACT GATGACAACC AGTTAGTCGT TATCTCTGAC
ACCCGCTCAG AAAAGTTTGA ACAACTTAGT CAAACCCCTG AAGCCCACGT TTGTTGGTAC
TTTTCTAAAA CCCGGGAACA ATACCGCTTT TCTTGCAAAG CATCGCTAGT CACCCTTGAA
CAAGATGACG AACTTGTCAC GTCTCAGTGG AATAAATTAT CGGATGCTGG CAAAAAGCAA
TTTTTATGGG GAGAGCCGGG CACGCCCAGA AATGATGGGT CAGCATTACA AATTGAAGGG
AGTTTTGACA AGGTGCCAAA TCACTTTTGC ACCATACTCC TTGCCATTAA TAGTGTTGAT
TACTTAAATC TTAGAGGTAA CCCACAACAC CGCGAGTGGC ATCATAAAGA TGAGAATGGT
AACTGGGTCA GCCAGTCGCT CATTCCCTAA
|
|---|
| Protein sequence | MEIAMPQWRQ GLTKSLHQTR SVPESRYFQL ASVDSNGVPY CRTVVFRGVT DDNQLVVISD
TRSEKFEQLS QTPEAHVCWY FSKTREQYRF SCKASLVTLE QDDELVTSQW NKLSDAGKKQ
FLWGEPGTPR NDGSALQIEG SFDKVPNHFC TILLAINSVD YLNLRGNPQH REWHHKDENG
NWVSQSLIP
|
|---|
| |