Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02326 |
Symbol | |
ID | 6777473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2514172 |
End bp | 2514804 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642755765 |
Product | hypothetical protein |
Protein accession | YP_002126616 |
Protein GI | 196157127 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.544292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAATG TGTTAGTTAT TGGCGCATCG GGACAAATTG GTAAACAGGC AACGGTTAAA CTTTTAGATG CGGGCCACAA AGTGTTAGCA CCGGTAAGAA GCCCTGAAAA ATTATCTGAC ATTCAAAACG ATGATTTAAC CGTGGTAGAG CAAAACTTAG AAGAAGATTT TTCTGCACAT TTTGAAGGTA TTGATATTGC CGTGTTTACG GCGGGGTCAG GCGGTAATAC CGGGGCAGAT AAAACACTGA TGATTGACTT ATGGGCCGCG CGCAATGCCG TTAACTACGC CAAAGCTGCG GGCACGTCAA AATTTGTAAT GGTGAGTTCA ATTGGAGCCG GCGACCCCGA CGCAGTATCT TCAGAAATTA AGCCTTACTT AGTCGCCAAG CATATGGCTG ACGAGCACCT AATTAACAGC GGATTACATC ACATTATTTT GCGCCCTGGA ACGCTTTTGA ACGAACCGGG TTCTCACTTG GTCCGCACTG ATATGCCAAA CAACAAAGAT GACGCCGTCA TTCCACGAGA AGACGTAGCA ACCGCTATTG TTGAAAGTAT TAGCCGAAAA GGTGAGGACA ACGTAATTAC ATACCTATTT AAAGGTGATA CGCCAATTTC TCAGGTCTTC TAA
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Protein sequence | MANVLVIGAS GQIGKQATVK LLDAGHKVLA PVRSPEKLSD IQNDDLTVVE QNLEEDFSAH FEGIDIAVFT AGSGGNTGAD KTLMIDLWAA RNAVNYAKAA GTSKFVMVSS IGAGDPDAVS SEIKPYLVAK HMADEHLINS GLHHIILRPG TLLNEPGSHL VRTDMPNNKD DAVIPREDVA TAIVESISRK GEDNVITYLF KGDTPISQVF
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