| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02283 |
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| Symbol | |
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| ID | 6775402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2467972 |
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| End bp | 2468868 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642755717 |
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| Product | pseudouridine synthase (makes pseudouridine2605 in 23 S RNA) |
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| Protein accession | YP_002126573 |
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| Protein GI | 196157084 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.268189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAA AGTTGCAAAA AGTACTGGCT AACCAAGGGC TAGGCTCGCG ACGAGAAATG
GAACGTTGGA TTGAGGAAGG CCGAGTATCG GTTAACGGTT CCGTAGCGAC ATTAGGTGAT
AGAGTTGACC ACACTGCGCA AATTCGCGTT GATGGCCATC TTTTATCACG TCAAACCGAG
CAGCCAATTT GTCGAGTGTT GATGTACAAC AAGCCAGAAG GTGAACTGTG TAGCCGTCAC
GACCCAGAAG GTCGAGATAC GGTGTTTGAC CGTCTGCCGG CTATTCGTCT AGGGCGCTGG
ATTACCGTTG GCCGTTTAGA CATGAACACC AGTGGTTTGC TTCTGTTTAC CAACGATGGT
GAGCTTGCAA ACCGCTTAAT GCATCCTAAG TGCGAAGTAG AACGTGAATA CGCCGTACGT
GTGTTTGGTG AAGTTTCGAC CAAGACACTA AACACACTTC AAAAAGGGGT AGAGCTAGAC
GACGGTGAAG CCAAATTTCT AACAATATCG GGTACGCCCA CGCCACAGCA TGCTGAAGAA
GAAAGCATGA ACCGTTGGTT CAACGTGACC TTGAAAGAAG GGCGTAACCG TGAAGTTCGC
CGTCTTTGGG AATCACAAGG CGTACAAGTT AGCCGCCTTA TCCGTGTTAA GTACGGCCCA
ATCGAGCTTC AAAAACGTCT GCCGCAAGGT GCGTGGGTTG AGCTAGGGCT AGAAGACGTA
AACGCGCTTC GCAATCATGT ACAGCTGCCT GATGAAACGC AGACTATGGT GAACGTTCGA
CAAGGTAAAC TCGACCACGC TCGTTTAAGT CGTATGCGCC GCTCAGTGAA AAAGCATAAA
GTTCGCAAGC AACAGGGCCT TAATAAAAGA GCGGGTCGCC CAGCAAAGCG CAAATAA
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| Protein sequence | MTEKLQKVLA NQGLGSRREM ERWIEEGRVS VNGSVATLGD RVDHTAQIRV DGHLLSRQTE
QPICRVLMYN KPEGELCSRH DPEGRDTVFD RLPAIRLGRW ITVGRLDMNT SGLLLFTNDG
ELANRLMHPK CEVEREYAVR VFGEVSTKTL NTLQKGVELD DGEAKFLTIS GTPTPQHAEE
ESMNRWFNVT LKEGRNREVR RLWESQGVQV SRLIRVKYGP IELQKRLPQG AWVELGLEDV
NALRNHVQLP DETQTMVNVR QGKLDHARLS RMRRSVKKHK VRKQQGLNKR AGRPAKRK
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