Gene MADE_02253 details

Gene Information

• Locus tag: MADE_02253
• Symbol: dnaK
• ID: 6775444
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: -
• Start bp: 2416498
• End bp: 2418426
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 642755687
• Product: molecular chaperone DnaK
• Protein accession: YP_002126543
• Protein GI: 196157054
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.402968
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAGAA TCATAGGTAT CGACTTAGGT ACAACGAATT CATGTGTCGC AGTTCTAGAC 
GGCGACAAAC CTCGCGTAAT TGAGAACGCG GAAGGCGATC GTACAACCCC TTCAATCATC 
GCTTATACAA ACGATGGTGA AACACTTGTA GGTCAATCTG CAAAGCGTCA GGCGGTAACA 
AACCCTGAAA ACACATTATT CGCAATTAAG CGTCTAATTG GTCGTCGCTT CCAAGATAAA 
GAAGTACAGC GCGATATCGA CATCATGCCT TTCAAAATTG TAGGTGCTGA TAACGGTGAC 
GCATGGGTAG AAGCTAAAGG CGAAAAAATG GCGCCTCCTC AGGTTTCTGC TGAAGTACTT 
AAGAAAATGA AGAAGACCGC TGAAGACTAT CTTGGCGAAG AAGTAACGGG TGCAGTAATT 
ACTGTTCCTG CTTACTTTAA CGATTCTCAG CGTCAAGCAA CCAAAGATGC AGGTCGTATC 
GCAGGTCTTG AAGTTAAGCG TATCATCAAC GAACCAACTG CTGCTGCTCT TGCCTACGGT 
ATGGACAAGA AGCAAGGCGA TAACGTTGTT GCAGTATACG ACTTAGGTGG TGGTACTTTT 
GATATCTCTA TCATCGAAAT CGATGAAGTA GACGGCGAGC ACACGTTTGA AGTACTAGCG 
ACTAACGGTG ACACACACCT TGGTGGTGAA GATTTCGATA ACCGTGTTAT CAACTACCTA 
GTTGAAGAAT TCAAGAAAGA TCAAGGTATC GACCTTCGTA AAGATCCGCT AGCTATGCAG 
CGTCTTAAAG AAGCGGGTGA AAAAGCGAAA ATCGAACTTT CTTCATCACA ACAGACAGAA 
GTTAACCTGC CTTACATCAC AGCTGATGCA ACAGGTCCTA AGCACTTAGC CATAAAGCTA 
ACTCGTGCAA AACTTGAGTC TTTGGTTGAA GACCTTGTGA AAAACTCGCT TAACCCACTT 
AAGCAAGCAC TAGCTGATTC AGACCTATCT GTAGGCGATA TCAATGACAT CATCCTTGTT 
GGTGGTCAAA CACGTATGCC GCTGGTACAG AAGTATGTAA CTGAATTCTT CGGCAAAGAG 
CCACGTAAAG ACGTTAACCC TGATGAAGCA GTAGCGGTAG GTGCGGCAAT TCAAGGTGGT 
GTACTTTCTG GTGACGTTAA AGACGTACTA CTGCTAGACG TTACGCCTCT GTCTCTAGGT 
ATCGAGACTA TGGGCGGCGT AATGACTGCG CTTATCGAGA AGAACACGAC TATTCCAACG 
AAGAAGTCAC AAACCTTCTC AACAGCGGAA GACAACCAGT CTGCGGTTAC CGTACACGTA 
CTACAGGGTG AGCGTAAGCA GTCAAGCGGC AACAAGTCTC TTGGTCAGTT TAACCTTGAA 
GGTATTCGTC CAGCAGCGCG CGGTGTACCG CAAATCGAAG TAACCTTCGA CCTAGATGCT 
GACGGTATCC TACACGTGTC TGCGAAAGAT AAAGACACAG GTAAAGAGCA GAAGATCACT 
ATCAAAGCTT CTTCAGGCCT AAGCGATGAA GAAGTAGAAA AAATGGTAGC TGACGCGGAA 
GCGAACAAAG AAGCTGATAA GAAGTTTGAA GAACTGATTC AAGCGCGTAA CCAAGCTGAT 
GGTATGGTTC ACGCCACACG TAAACAGCTT GAAGAAGTTG GCGATGCACT AAGTGCAGAG 
GACAAAGCGC CAATCGAAGA AGCACTTTCA GCACTTGAAA CTGCAGTTAA AGGCGAAGAC 
AAAGCAGAAA TTGAAGCGAA AACGCAAGAA CTTATTCAAG CGTCTAGCAA GTTGATGGAA 
GCGGCGCAAG CTCAACAAGC AGCAGCTGGT GGCGCAGAAG GCGCTGAGCA GCAAGCTTCT 
TCTGGTCAAG CAAACGATGA CGTTGTTGAC GCAGAATTTG AAGAAGTTAA AGACGACGAC 
AAGAAGTAA 

 

Protein sequence

MGRIIGIDLG TTNSCVAVLD GDKPRVIENA EGDRTTPSII AYTNDGETLV GQSAKRQAVT 
NPENTLFAIK RLIGRRFQDK EVQRDIDIMP FKIVGADNGD AWVEAKGEKM APPQVSAEVL 
KKMKKTAEDY LGEEVTGAVI TVPAYFNDSQ RQATKDAGRI AGLEVKRIIN EPTAAALAYG 
MDKKQGDNVV AVYDLGGGTF DISIIEIDEV DGEHTFEVLA TNGDTHLGGE DFDNRVINYL 
VEEFKKDQGI DLRKDPLAMQ RLKEAGEKAK IELSSSQQTE VNLPYITADA TGPKHLAIKL 
TRAKLESLVE DLVKNSLNPL KQALADSDLS VGDINDIILV GGQTRMPLVQ KYVTEFFGKE 
PRKDVNPDEA VAVGAAIQGG VLSGDVKDVL LLDVTPLSLG IETMGGVMTA LIEKNTTIPT 
KKSQTFSTAE DNQSAVTVHV LQGERKQSSG NKSLGQFNLE GIRPAARGVP QIEVTFDLDA 
DGILHVSAKD KDTGKEQKIT IKASSGLSDE EVEKMVADAE ANKEADKKFE ELIQARNQAD 
GMVHATRKQL EEVGDALSAE DKAPIEEALS ALETAVKGED KAEIEAKTQE LIQASSKLME 
AAQAQQAAAG GAEGAEQQAS SGQANDDVVD AEFEEVKDDD KK