| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02244 |
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| Symbol | |
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| ID | 6775925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2405476 |
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| End bp | 2406798 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755678 |
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| Product | carbamoyl-phosphate synthase small subunit |
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| Protein accession | YP_002126534 |
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| Protein GI | 196157045 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0231375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCATG TATACTCGCC GGAATTTGCC AGAATTTCGT ATTCTGAGGC TGCCAAACCT
GCTGAAGAGT ACGGTTTTAT TAGCTGCAAA GATCGTAAAA CGGGATGTAT TGTTATCAAT
AACTCCCGTT TTTTGTGGGG TTTGTGCAAA AAACTGCACA AACACATAGT TATCCTTAAT
CTGGAGGTTG ACTTGGCTAA TTCTGCCCTT TTGGTGTTAG AGGATGGTTC TGTTTTTAAA
GGTACGGCGA TAGGCGCTAC AGGCTCCGCC GTCGGGGAAG TCGTTTTTAA TACTTCCATG
ACCGGCTATC AAGAAATTCT CACCGACCCA TCCTACGCTG AACAAATCAT CACACTTACC
TATCCACACA TTGGCAACAC CGGCACTAAC GAAGAAGACG TCGAAGCAGA TAAAATCTGG
TCGAAAGGTC TAATCATCCG TGACCTACCT CTTGTTGCTA GTAACTTTCG TCAACAGCAA
ACATTGTCTG AATACCTAAA AGCGAAAGGC GTTGTGGGTA TTGCTGACAT AGATACCCGA
CGTTTAACGC GTATCTTACG AGACAAAGGT GCACAAAATG GCTGCATCAT TTGCTCAGAT
GAATTAGACG AGTCTAGTGC ACTGGCGCAA GCAAAAGATT TTCCTGGCCT TAAAGGCATG
GATTTGGCGA AAGTAGTAAG TATTACTGAG CCGAAAACAT GGACAGAAGG TAGCTGGGAG
CTTGGCAAAG GTTATGTAAC GCCAAGCGAA ACAAAATATC ACGTTGTGGC ATACGACTAC
GGCGTAAAAA ACAATATTCT TCGCATGTTA GCCGACCGCG GTTGTAAAAT AACGTTGGTT
CCAGCACAAA CACCTGCTGA AGAGGTATTA GCCCTAAATC CAGATGGTGT ATTCCTGTCG
AACGGTCCTG GCGACCCTGA GCCATGTGAC TATGCAATTA CGGCTATCAA AACCATCGTT
GAAACCGGTG TACCTGTGTT TGGTATCTGT CTTGGCCACC AACTTCTTGC TATTGCAAGC
GGTGCTAAAA CAGTGAAGAT GAAGTTTGGT CACCATGGTG CAAACCATCC GGTTAAAGAC
CTAAAGCGCA ATGTAGTTAT GATCACTAGC CAAAACCACG GGTTTGCGGT TGATGAGTCT
AGCTTGCCAG ATAACCTAGA AGTAACTCAC ATTTCGTTGT TCGACAAGTC GTTGCAGGGT
ATTCACCGCA CCGACAAGCC TGCGTTTAGT TTCCAGGGTC ACCCTGAAGC GAGCCCAGGT
CCTCATGAAG CGGCACCGTT ATTCGACCAC TTCATTGAAC TTATTGAACA ACACAAGCAG
TAG
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| Protein sequence | MSHVYSPEFA RISYSEAAKP AEEYGFISCK DRKTGCIVIN NSRFLWGLCK KLHKHIVILN
LEVDLANSAL LVLEDGSVFK GTAIGATGSA VGEVVFNTSM TGYQEILTDP SYAEQIITLT
YPHIGNTGTN EEDVEADKIW SKGLIIRDLP LVASNFRQQQ TLSEYLKAKG VVGIADIDTR
RLTRILRDKG AQNGCIICSD ELDESSALAQ AKDFPGLKGM DLAKVVSITE PKTWTEGSWE
LGKGYVTPSE TKYHVVAYDY GVKNNILRML ADRGCKITLV PAQTPAEEVL ALNPDGVFLS
NGPGDPEPCD YAITAIKTIV ETGVPVFGIC LGHQLLAIAS GAKTVKMKFG HHGANHPVKD
LKRNVVMITS QNHGFAVDES SLPDNLEVTH ISLFDKSLQG IHRTDKPAFS FQGHPEASPG
PHEAAPLFDH FIELIEQHKQ
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