| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02243 |
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| Symbol | carB |
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| ID | 6775679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2402241 |
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| End bp | 2405462 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642755677 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_002126533 |
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| Protein GI | 196157044 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACCGACAT AAAAAGTATT CTTATCATTG GTGCTGGCCC TATTGTAATC
GGCCAGGCTT GTGAATTCGA CTATTCAGGC GCGCAAGCGT GTAAAGCCCT TCGCGAAGAA
GGCTACCGTG TTATTTTGGT TAACTCTAAC CCAGCAACCA TCATGACCGA CCCAGAAATG
GCAGATGCGA CTTACATCGA GCCTATTCAC TGGGAAGTAG TACGCAAAAT TATCGAAAAA
GAACGTCCAG ACGCCATTCT TCCTACTATG GGTGGGCAAA CAGCCCTTAA CTGTGCGCTA
GAGCTTGATA AGCACGGTGT ACTAGAAGAA TTTGGCTGTG AGCTTATTGG CGCAACGGCT
GACGCTATCG ATAAGGCGGA AAACCGTGAA CGCTTTGACC AAGCGATGAA AAACATTGGC
CTTGAGTGTC CACGTGCGGA AATCGCCCAC AGCATGGACG AAGCGCACGA TGTGCTAAGT
CGCATCGGCT TCCCATGTAT CATTCGTCCT TCATTCACCA TGGGCGGAAC CGGCGGTGGT
ATTGCCTACA ACATTGATGA GTTCAATGAA ATTTGTACCC GCGGCCTCGA CCTTTCCCCC
ACCAACGAAC TTCTTATTGA TGAGTCGTTA CTTGGCTGGA AAGAATACGA GATGGAAGTA
GTACGCGATA AGGCAGATAA CTGCATTATT GTTTGTACAA TTGAAAACTT CGATCCAATG
GGGGTTCATA CGGGCGACTC TATCACTGTT GCCCCAGCGC AAACCCTTAC CGACAAAGAA
TTCCAGATTA TGCGTAATGC AGCGATGGCT GTACTACGTG AAATTGGTGT TGAAACCGGT
GGTTCAAACG TACAGTTTGG CGTAGACCCT AAAACCGGTC GTATGGTTAT CATCGAAATG
AACCCGCGTG TATCGCGTTC ATCGGCGCTA GCCTCTAAAG CAACGGGCTT CCCGATTGCG
AAAGTGGCTG CGAAGTTAGC AGTAGGTTAC ACCCTAGATG AGCTAGCTAA CGACATCACT
GGCGGTTTAA CGCCGGCGTC GTTTGAACCG TCAATCGATT ACGTTGTCAC TAAGATCCCT
CGCTTCAACT TTGAAAAGTT TGCCGGTGCT AACGACCGTC TCACCACACA GATGAAGTCA
GTGGGCGAGG TGATGGCGAT TGGTCGTAAC CAACAAGAGT CGTTACAAAA AGCCCTTCGT
GGTCTTGAAG TTGGTGCGTC AGGTTTGAAC CCAATGGTTG ACCTTGAAGA CCCTGAGTCG
CGCAATAAAG TCGTTTACGA ACTTCGCCAG CCGGGTGCAG AGCGTATTTG GTACATTGGC
GATGCATTCC GTATGGGCAT GAGCGTTGAA GAAGTGTTCA ACCTTACCAA TATTGACCGC
TGGTATTTAG TGCAGCTAGA AGATCTTATT CTTCTTGAAG CGAAAGTGGC AGAACTTGGT
TTGCCGGGTA TTGATGCTGA CTTTATGCGC GCGCTAAAGC GCAAAGGTTT CTCAGATGCA
CGTCTTGCTG AGCTGACCAA AGTGGCAGAA AGCGATATTC GTGAAGCTCG TCGCGGTTTT
GGCATTTCTC CAGTGTACAA GCGCGTAGAT ACGTGTGCCG CAGAGTTCTC TACCAGCACG
GCTTATATGT ATTCGACCTA TGACGAAGAG TGTGAAGCTG CGCCAACCGA TAAAGAGAAA
ATCATGGTAT TGGGCGGTGG CCCTAACCGT ATCGGTCAAG GCATTGAATT CGATTATTGC
TGCGTTCACG CGGCGCTTTC AATGCGTGAA GACGGTTACG AGACCATTAT GGTTAACTGT
AACCCTGAAA CGGTGTCTAC TGACTACGAC ACGTCAGATC GCTTGTATTT CGAACCAGTA
ACGCTGGAAG ATGTACTTGA AATCGTTGCT AAAGAGCAGC CAAAAGGCGT TATCGTACAG
TACGGTGGTC AAACGCCTCT TAAACTTGCT CGTGCCCTAG AAGCAGCAGG CGTACCGGTT
ATCGGTACCT CACCTGAAGC GATTGACCGT GCTGAAGACC GTGAGCGTTT CCAGCAAATG
GTGAACAAGC TTAATCTTAA GCAGCCTGCG AATGCGACAG TAACTAACGT CGAGCAAGCG
CTAACTATGG CTGAAGAGAT TGGCTTCCCG CTGGTTGTTC GTCCAAGCTA CGTGTTAGGT
GGACGTGCGA TGGAAATCGT TTACGACATT AAAGACCTTA AGCGTTATCT AAACGAAGCG
GTTAAAGTGT CTAACGACGC GCCCGTATTG CTAGACCGTT TCCTAGATGA CGCTATCGAA
GTGGATATCG ATGCTATATG CGACGGTAAA GAGGTTGTGA TTGGCGGTAT CATGGAACAC
ATCGAACAAG CGGGTGTTCA CTCTGGTGAC TCTGCATGTT CACTGCCTCC GCATTCACTC
CCCAAAGACA TCCAGGACGT GATGCGCGAG CAGGTAAAAG CCATGGCGCT AGAGCTTGGC
GTAGTGGGGC TAATGAATAC CCAGTTTGCG ATAAAAGACG GCGAAGTTTA CCTAATCGAG
GTTAACCCGC GTGCAGCGCG TACGGTACCT TTCGTATCAA AAGCCACGGG CATTCCTCTT
GCTAAAGTTG CGGCACGTGC AATGGCGGGC GTAAGCTTGG CAGAGCAGGG CGTAACTGAA
GAAGTGATCC CACCTTTCTA CTCGGTGAAA GAAGTGGTAC TTCCGTTTGC TAAGTTCCAA
GGTGTTGACC CACTGTTAGG CCCAGAAATG CGCTCAACTG GTGAAGTTAT GGGTGTTGGC
GATACGTTTG AAGAAGCGTA CGCTAAAGCG AACCTTGGCG CAGGCGCGCC ACTGCCGAAA
GAAGGTAAAG CACTTATCTC TGTGCGTGAA ACTGACAAGC CGAAAATTAT CGAGCTAGCT
AAGGCCCTTG TTGCGGCTGG GTTCAGTATT GAAGCCACGC GCGGTACAGC AACGACCTTG
TACGATGCAG GTATAATGAG CACGGTGGTG AATAAGCTAT CTGAAGGCCG ACCTAACATT
GTTGATGCTA TCAAAAACGG TGAATACGCT TATTTGATAA ATACAACAGA AGGTCGCCAA
GCGATTACCG ATTCAGTTTA CATACGTCGT GAAGCCTTGG TGAACAAGGT TACCTATACC
ACCACGATGA ATGCAGCGTT TGCAACTATT CGCGCTAAGT CTGCTGATGA CCGCAATAAA
GTGGCTTCAG TTCAAGAACT GCACGCTAGG CTTAAACACT GA
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| Protein sequence | MPKRTDIKSI LIIGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADATYIEPIH WEVVRKIIEK ERPDAILPTM GGQTALNCAL ELDKHGVLEE FGCELIGATA
DAIDKAENRE RFDQAMKNIG LECPRAEIAH SMDEAHDVLS RIGFPCIIRP SFTMGGTGGG
IAYNIDEFNE ICTRGLDLSP TNELLIDESL LGWKEYEMEV VRDKADNCII VCTIENFDPM
GVHTGDSITV APAQTLTDKE FQIMRNAAMA VLREIGVETG GSNVQFGVDP KTGRMVIIEM
NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELANDIT GGLTPASFEP SIDYVVTKIP
RFNFEKFAGA NDRLTTQMKS VGEVMAIGRN QQESLQKALR GLEVGASGLN PMVDLEDPES
RNKVVYELRQ PGAERIWYIG DAFRMGMSVE EVFNLTNIDR WYLVQLEDLI LLEAKVAELG
LPGIDADFMR ALKRKGFSDA RLAELTKVAE SDIREARRGF GISPVYKRVD TCAAEFSTST
AYMYSTYDEE CEAAPTDKEK IMVLGGGPNR IGQGIEFDYC CVHAALSMRE DGYETIMVNC
NPETVSTDYD TSDRLYFEPV TLEDVLEIVA KEQPKGVIVQ YGGQTPLKLA RALEAAGVPV
IGTSPEAIDR AEDRERFQQM VNKLNLKQPA NATVTNVEQA LTMAEEIGFP LVVRPSYVLG
GRAMEIVYDI KDLKRYLNEA VKVSNDAPVL LDRFLDDAIE VDIDAICDGK EVVIGGIMEH
IEQAGVHSGD SACSLPPHSL PKDIQDVMRE QVKAMALELG VVGLMNTQFA IKDGEVYLIE
VNPRAARTVP FVSKATGIPL AKVAARAMAG VSLAEQGVTE EVIPPFYSVK EVVLPFAKFQ
GVDPLLGPEM RSTGEVMGVG DTFEEAYAKA NLGAGAPLPK EGKALISVRE TDKPKIIELA
KALVAAGFSI EATRGTATTL YDAGIMSTVV NKLSEGRPNI VDAIKNGEYA YLINTTEGRQ
AITDSVYIRR EALVNKVTYT TTMNAAFATI RAKSADDRNK VASVQELHAR LKH
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