Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02118 |
Symbol | |
ID | 6775744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2285735 |
End bp | 2286904 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642755556 |
Product | tetratricopeptide repeat protein |
Protein accession | YP_002126412 |
Protein GI | 196156923 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000128021 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGAAC TGCTGTTTCT TCTTTTGCCT GTTGCGGCGG GATATGGCTG GATAATGGGC CGAAATAGTG TCCGTCAAGC GCAGCGCAAA CAGTCGAGCA TTCTTTCTAA GCACTATTAT AAAGGCTTGA ATTTCCTGCT GTCAGATCAG CCGGATAAAG CGGTAGACAC GTTAATCAAA ATGATTAATG TGAATAGCGA TACGGTAGAG ACCCATATTG CGATGGGAAG CTTCTTTCGC CACCGTGGAG AGATTGACCG CGCGATAAAA GTTCATCAGA ACTTAGTAAG CCGAGACGAG CTTCAACCAG CTCAGCGTGA AAACGCGCTA AGAGAGCTCG GTCACGATTA CACCCAAGCC GGGTTTCTCG AAAGAGCAGA AAATGCCTTC CTTCAGCTAT TAAACAGCGA AAAGCACTAC CTCGTTGCCC AACAGCAATT ATTCAGCATT TACCAAACCA CCAAAGAGTG GGAACGAGCG ATAGAGCTTG CCGAGCATAT GGTGCAATGT CATGGCGACA ATGACGATGT ATGTGAACGT TTAGCGCATT TTTATTGCGA ACAGGCAGCG GTCGAGCTTA AAAACGAAAG CCAAGGGGCC GCATTAACCC TATTGCAAAA AGCGGTAAAC GCCGATGAGC ATGCCGTTAG GCCGTGGTTA ATGCTAGGCG ACATAGCCCT TGAGCAAAAA CGATTTACTG ACGCGAATGC CTATTTCACA CAAGTTGCAG AGCGCGATAT TAACTGGTTC AGCGAAGCTG TGCCGAGTCT CGAAAAAATC GCGGAAGAAA CCGACGACTG GGATAGCTTT CAGAAAAACT TGGAAGCCCA TTGGCAAGAG TGCGCCACCT CATACCTTGC TATGGTAGAT GTGCTGATGA AGCGTGGTGA AACAGCGCAA GCTGCAGAAT ATTTACTTGA ACAGCTTCGC AAGAGGCCTA CTATGCGAGG CTTTAAAACG CTAATGGGCC TTTACATCGA CCAGTTAACA GATCAAACCA CGGCAGACAG TCTGCGTTTG TTAAAAGAGT TAGTAGAAAA GCAAATGTTG CAGCGCCCTA AGTACCGCTG CGGAAGTTGT GGCTTTTCAG GCCGAAAATT ATATTGGCTG TGCCCGAGCT GTAAAAAGTG GGGCGTAGTA AAACCTATCA AAGGGCTAGA CGGAGAATAA
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Protein sequence | MLELLFLLLP VAAGYGWIMG RNSVRQAQRK QSSILSKHYY KGLNFLLSDQ PDKAVDTLIK MINVNSDTVE THIAMGSFFR HRGEIDRAIK VHQNLVSRDE LQPAQRENAL RELGHDYTQA GFLERAENAF LQLLNSEKHY LVAQQQLFSI YQTTKEWERA IELAEHMVQC HGDNDDVCER LAHFYCEQAA VELKNESQGA ALTLLQKAVN ADEHAVRPWL MLGDIALEQK RFTDANAYFT QVAERDINWF SEAVPSLEKI AEETDDWDSF QKNLEAHWQE CATSYLAMVD VLMKRGETAQ AAEYLLEQLR KRPTMRGFKT LMGLYIDQLT DQTTADSLRL LKELVEKQML QRPKYRCGSC GFSGRKLYWL CPSCKKWGVV KPIKGLDGE
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