Gene MADE_02118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02118 
Symbol 
ID6775744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2285735 
End bp2286904 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content48% 
IMG OID642755556 
Producttetratricopeptide repeat protein 
Protein accessionYP_002126412 
Protein GI196156923 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2956] Predicted N-acetylglucosaminyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000128021 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGAAC TGCTGTTTCT TCTTTTGCCT GTTGCGGCGG GATATGGCTG GATAATGGGC 
CGAAATAGTG TCCGTCAAGC GCAGCGCAAA CAGTCGAGCA TTCTTTCTAA GCACTATTAT
AAAGGCTTGA ATTTCCTGCT GTCAGATCAG CCGGATAAAG CGGTAGACAC GTTAATCAAA
ATGATTAATG TGAATAGCGA TACGGTAGAG ACCCATATTG CGATGGGAAG CTTCTTTCGC
CACCGTGGAG AGATTGACCG CGCGATAAAA GTTCATCAGA ACTTAGTAAG CCGAGACGAG
CTTCAACCAG CTCAGCGTGA AAACGCGCTA AGAGAGCTCG GTCACGATTA CACCCAAGCC
GGGTTTCTCG AAAGAGCAGA AAATGCCTTC CTTCAGCTAT TAAACAGCGA AAAGCACTAC
CTCGTTGCCC AACAGCAATT ATTCAGCATT TACCAAACCA CCAAAGAGTG GGAACGAGCG
ATAGAGCTTG CCGAGCATAT GGTGCAATGT CATGGCGACA ATGACGATGT ATGTGAACGT
TTAGCGCATT TTTATTGCGA ACAGGCAGCG GTCGAGCTTA AAAACGAAAG CCAAGGGGCC
GCATTAACCC TATTGCAAAA AGCGGTAAAC GCCGATGAGC ATGCCGTTAG GCCGTGGTTA
ATGCTAGGCG ACATAGCCCT TGAGCAAAAA CGATTTACTG ACGCGAATGC CTATTTCACA
CAAGTTGCAG AGCGCGATAT TAACTGGTTC AGCGAAGCTG TGCCGAGTCT CGAAAAAATC
GCGGAAGAAA CCGACGACTG GGATAGCTTT CAGAAAAACT TGGAAGCCCA TTGGCAAGAG
TGCGCCACCT CATACCTTGC TATGGTAGAT GTGCTGATGA AGCGTGGTGA AACAGCGCAA
GCTGCAGAAT ATTTACTTGA ACAGCTTCGC AAGAGGCCTA CTATGCGAGG CTTTAAAACG
CTAATGGGCC TTTACATCGA CCAGTTAACA GATCAAACCA CGGCAGACAG TCTGCGTTTG
TTAAAAGAGT TAGTAGAAAA GCAAATGTTG CAGCGCCCTA AGTACCGCTG CGGAAGTTGT
GGCTTTTCAG GCCGAAAATT ATATTGGCTG TGCCCGAGCT GTAAAAAGTG GGGCGTAGTA
AAACCTATCA AAGGGCTAGA CGGAGAATAA
 
Protein sequence
MLELLFLLLP VAAGYGWIMG RNSVRQAQRK QSSILSKHYY KGLNFLLSDQ PDKAVDTLIK 
MINVNSDTVE THIAMGSFFR HRGEIDRAIK VHQNLVSRDE LQPAQRENAL RELGHDYTQA
GFLERAENAF LQLLNSEKHY LVAQQQLFSI YQTTKEWERA IELAEHMVQC HGDNDDVCER
LAHFYCEQAA VELKNESQGA ALTLLQKAVN ADEHAVRPWL MLGDIALEQK RFTDANAYFT
QVAERDINWF SEAVPSLEKI AEETDDWDSF QKNLEAHWQE CATSYLAMVD VLMKRGETAQ
AAEYLLEQLR KRPTMRGFKT LMGLYIDQLT DQTTADSLRL LKELVEKQML QRPKYRCGSC
GFSGRKLYWL CPSCKKWGVV KPIKGLDGE