Gene MADE_02062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02062 
Symbol 
ID6775694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp2232432 
End bp2233091 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content48% 
IMG OID642755497 
Productintegral membrane protein 
Protein accessionYP_002126358 
Protein GI196156869 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.157996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGGA TTAATTACTT TTCTGCCTTT CTTATAGGTT TAGCAGGAGG CGTACATTGT 
GTAGGCATGT GCGGCGGTAT TGTTGCAGCG CTTAGAGTGG TATCGCCAAA GGGGGCACCG 
GCATTGCCCT ACACCCTCGC CTACAACATG GGACGCATTA CTAGCTATAC ACTAGCAGGG 
GCCATTACCG GTGCGCTTGG AAAAATAGCT GCTGACTTCG TACCGCTTGC TAATTATGCC 
CTCTCTCTTC TAAGCGGCAT CATGTTGCTT TTACTCGCTT GTTACTTAGG GAAATGGTGG 
ACGGGTTTAT CGGTCTTAGA AAACGCGGGC AAAGGCCTGT TTGCAAAGCT TCAGCCTTTA 
TCAAAACGAT TTCTTCCTTT CAAAACGCCG TTAAGCGCGG TTCCCTACGG CTTTATATGG 
GGCTGGCTAC CATGTGGATT GGTCTATTCA ACGCTAACCT GGTCTCTGGC AGCGGGTAAT 
GCATTGCAAG GCGCTGGCAT TATGTTTTTC TTCGGTTTGG GAACGTTACC CACACTGTTA 
GCCGCAAGTG CCGGTAGCCA GTATCTTGTT CAAAGCTTTC AGCACAGCTA TGTGAGACAA 
GTCATAGCTG TGATAATGGC CATATACGCC ACTTATCTAA TTTATGGCGC ATTCATGTGA
 
Protein sequence
MDGINYFSAF LIGLAGGVHC VGMCGGIVAA LRVVSPKGAP ALPYTLAYNM GRITSYTLAG 
AITGALGKIA ADFVPLANYA LSLLSGIMLL LLACYLGKWW TGLSVLENAG KGLFAKLQPL 
SKRFLPFKTP LSAVPYGFIW GWLPCGLVYS TLTWSLAAGN ALQGAGIMFF FGLGTLPTLL 
AASAGSQYLV QSFQHSYVRQ VIAVIMAIYA TYLIYGAFM