Gene MADE_02055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02055 
Symbol 
ID6775589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2227310 
End bp2227915 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content46% 
IMG OID642755490 
Productcbb3-type cytochrome c oxidase subunit II 
Protein accessionYP_002126351 
Protein GI196156862 
COG category[C] Energy production and conversion 
COG ID[COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit 
TIGRFAM ID[TIGR00781] cytochrome c oxidase, cbb3-type, subunit II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0396695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACG CACATGAGTT AATTGAAAAA AATGTCGGTC TGTTAACGGT ATTAATTCTT 
ATCGCTATCA GCTTTGGTGC CATGGTGCAA ATTACGCCGT TGATGTTTCA ACAGCAAACC
ATGGAACCGG TAAAAGGCTT ACGTCCATAT ACCGCGCTTG AGCTAGAAGG CCGTGACATC
TACATTCGTG AAGGCTGTGT AGGTTGTCAT AGTCAGATGA TCCGTCCATT TCGCGCAGAA
ACAGAGCGTT ATGGTCACTA CAGCGTTGCT GGTGAGTCAG TATGGGAGCA CCCTTTCCTT
TGGGGCTCTA AGCGTACTGG TCCTGACCTT GCACGTGTTG GTGGTCGTTA CAGCGATGAA
TGGCATCGTG TTCACCTGCT TAATCCTCGT AACGTAGTAC CAGAGTCGAA CATGCCAGGT
TTCCCTTGGC TTGCGGAAAA CACGCTTGAC GGCGAGTTAA CAGCTAAAAA AATGGAAGTA
TTCCGTGGAT TTGGTGTTCC GTATACCGAC GAAGATATTG CGGGTGCGAA AGCGGCAGTA
AAGGGTAAAA CGGAAATGCA AGCCCTTATT GCTTATCTAC AATCTCTTGG CACACATTTG
AAATAA
 
Protein sequence
MKNAHELIEK NVGLLTVLIL IAISFGAMVQ ITPLMFQQQT MEPVKGLRPY TALELEGRDI 
YIREGCVGCH SQMIRPFRAE TERYGHYSVA GESVWEHPFL WGSKRTGPDL ARVGGRYSDE
WHRVHLLNPR NVVPESNMPG FPWLAENTLD GELTAKKMEV FRGFGVPYTD EDIAGAKAAV
KGKTEMQALI AYLQSLGTHL K