| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02002 |
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| Symbol | |
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| ID | 6775461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2158770 |
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| End bp | 2160812 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642755439 |
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| Product | carboxy-terminal protease |
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| Protein accession | YP_002126300 |
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| Protein GI | 196156811 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.373627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGACA TCCTTCGAAT TTCCATCGCC AGTGCTTTTC TTACCGTTGG GGTAGGAGCA
GGTGCTGTTA CGTCAACACC AGAAGTAGAC GAGCTTCCTA TTTTGCAGCA GGAATCTCAG
CACAGTGTTG CGGCTAAGCG AGTAAGCGCA CTCTTCACTA GAGCGCATTA CAAGGAAATC
GCGTTGGATG ACGTCCTCTC GGCACGAGTT TATCAGCGCT TTATCGATTC GTTAGATCAC
AATAAGCAAG TTTTACTGTT ATCTGACGTT GTGAGTTTTG AAAAATATCG CACGCTATTC
GATGATGCGC TGAGTAAAGG CAACCTGTCA GTCGCTTATG ACATGTACAA TGTAAGCGCA
AAACGCCGTA TAGAACGCTA TGAATTCGCG TTAGACTTAT TAGAAAAAGG GCCGTTCGAC
TTCGAAAAAG AAGGAGACAA GTTCTTTTAT GATAGAGAAG ACGCTGAGTG GCCGGCGAAT
AAAGCCGAGC TAGATGAAAT TTGGCGTCAA CGTGTTAAAT ACGATGCGCT GAATCTTATT
CTTGCTGACA AGACATGGGA AGAAGCGAAA GCGCTTCTAA CTAAACGCTA TACACGTGCC
ATTAAACGTA CAAAGCAAGC AAAAAGCGAA GACGTTTTCC AAACGGCAAT GAACGCTTTT
GCACGCACAA TTGAAGCGCA CACAAGTTAT TTATCTCCCC GCAATGCCGA ACGTTTCCAG
ATGGACATGA ACTTGTCTTT CGAAGGAATA GGCGCGGTGT TACAAAGTGA AGACGACTAC
ACCGTTATTA AAAGTGTTGT TCCAGGCGGT CCTGCCGATG AGTCAGGTGC AATTAAGCCG
GAAGACAAAA TTGTTGGTGT AGCGCAAGAC GATGAAGAAT TCGTCGATGT TATCGGCTGG
CGTTTGGACG AAGTGGTTGA GCTTATAAAA GGGCCAAAAG GTAGTACGGT TCGTCTTCAA
GTCGAAAAAG GGGCGACCGA GTCGAAAACC ACGTCAGTTG TAAGCCTTAC CCGCGATAAG
ATCAAACTTG AAGATCGGGC TGCTAAGTCT GAGGTTTACG TCCCTGAAAC AGGCCCTCAC
GCAGATGAGC CCCTTGGCGT TATTACTATC CCAAGTTTTT ACAACAACCT AAGCATGGAT
GTTGCAAAAG AAATAGAAAG CTTAAAAGCA CAAAATGTTA AAGGGGTAAT TGTTGATTTA
CGCGGTAATG GTGGCGGGTC ACTTACCGAA GCTACACTGC TAACAGGTCT ATTCATTGAA
AAAGGGCCAG TGGTTCAAAT TCGTTATGGC CAAAGTAAGG TTAGCGTAAA CCGCGATACC
GATGGTGAAG TTGCGTACGA CGGTCCGCTA ACTGTACTTG TTGATAGATA CAGCGCCTCT
GCGTCGGAAA TATTTGCAGC TGCCATGCAA GACTACAACA GAGCATTAAT CGTCGGTGAA
CAAACCTTTG GTAAGGGCAC GGTGCAACAA CATCGCGGCT TAGGCAAAAT TTACGACCTG
TACGATAATC CATTAGGTAG TGTTCAATTT ACTATTGCTA AGTTCTATCG CATTGATGGC
GGAAGCACGC AGCACAAAGG TGTAATTCCA GATATCCTTT ATCCATCTGC CGTAGAACCT
GCAGAGTGGG GCGAGAGTCA GGCTGAAAAT GCATTGCCGT GGGATAGCAT TAATCGTGCA
AATTACACTA CCTTTGCTGA TGGCACCGCG GCGCTAGATG TGCTGACTGC TAAACACAAT
AAGCGTATTA TGCAAGATCC TGAATTTTCT TATATTCATG AAGACATCAA GGAATATAAA
GAAAATAAAG ACAAGGATTT TATTTCATTA GTTAAGTCTG AACGTGAAGC AGAGAAAAAA
GAAGCGGAAG AAAAGTCGCT TGCTCGTGCT AACGAACGTT TACAGCGTAT GGGAATGGAA
ACGGTCTCAA CATTGGACGA CCTACCTGAA GATATGGAAG AATTAGACCC ATTCTTAGAT
GAAGCGGCCA ATATAACTTT CGATATGATT GAAACAGGCC GTTACGCAAT AACAAGAAAC
TAA
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| Protein sequence | MRDILRISIA SAFLTVGVGA GAVTSTPEVD ELPILQQESQ HSVAAKRVSA LFTRAHYKEI
ALDDVLSARV YQRFIDSLDH NKQVLLLSDV VSFEKYRTLF DDALSKGNLS VAYDMYNVSA
KRRIERYEFA LDLLEKGPFD FEKEGDKFFY DREDAEWPAN KAELDEIWRQ RVKYDALNLI
LADKTWEEAK ALLTKRYTRA IKRTKQAKSE DVFQTAMNAF ARTIEAHTSY LSPRNAERFQ
MDMNLSFEGI GAVLQSEDDY TVIKSVVPGG PADESGAIKP EDKIVGVAQD DEEFVDVIGW
RLDEVVELIK GPKGSTVRLQ VEKGATESKT TSVVSLTRDK IKLEDRAAKS EVYVPETGPH
ADEPLGVITI PSFYNNLSMD VAKEIESLKA QNVKGVIVDL RGNGGGSLTE ATLLTGLFIE
KGPVVQIRYG QSKVSVNRDT DGEVAYDGPL TVLVDRYSAS ASEIFAAAMQ DYNRALIVGE
QTFGKGTVQQ HRGLGKIYDL YDNPLGSVQF TIAKFYRIDG GSTQHKGVIP DILYPSAVEP
AEWGESQAEN ALPWDSINRA NYTTFADGTA ALDVLTAKHN KRIMQDPEFS YIHEDIKEYK
ENKDKDFISL VKSEREAEKK EAEEKSLARA NERLQRMGME TVSTLDDLPE DMEELDPFLD
EAANITFDMI ETGRYAITRN
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