Gene MADE_01987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01987 
Symboldcd 
ID6775803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp2145870 
End bp2146463 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content48% 
IMG OID642755423 
Productdeoxycytidine triphosphate deaminase 
Protein accessionYP_002126285 
Protein GI196156796 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0717] Deoxycytidine deaminase 
TIGRFAM ID[TIGR02274] deoxycytidine triphosphate deaminase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.303345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTGT GCGACCGCGA TATCTATCAA CATCTTCAAG ATGGAAAAAT CAAAATTGAC 
CCAACACCAG ACTACGATCA GATTAGTGGT GTAACGGTAG ATATCCGTTT AGGCAATAAA 
TTTCGCGTGT TTGAAGATCA CCAAGCGCCG TTTATTGATT TAAGCGGCCC TAAAGCGCAG 
GTTCAAGAAG CCCTCGACCA CGTAATGAGC GACGAAATTG AACTAGAAGA AGGTAAAGCC 
TTTTTCTTGC ATCCTGGAGA ACTTGCGCTG GCAATTACGC ACGAGTCGGT AACCTTGCCA 
GATAACATCG TAGGATGGCT AGACGGGCGT TCATCGCTTG CGCGCTTAGG CCTAATGGTG 
CACGTCACGG CTCATCGTAT TGACCCGGGT TGGTCGGGTA ATATCGTGCT TGAGTTTTAC 
AACAGCGGTA AACTGCCCCT AGCGCTTCGA CCAAAAATGA AAATTGGCGC GCTTAGCTTT 
GAGGTGTTAT CAGCGCCCGC TGAGAAGCCT TACAACGCAA GGGTTGATGC TAAATACAAG 
GGCCAAGCCG GTGCTGTAGC TAGCCGAATT TCTTCGGATG ACCAAAGTAA ATAG
 
Protein sequence
MRLCDRDIYQ HLQDGKIKID PTPDYDQISG VTVDIRLGNK FRVFEDHQAP FIDLSGPKAQ 
VQEALDHVMS DEIELEEGKA FFLHPGELAL AITHESVTLP DNIVGWLDGR SSLARLGLMV 
HVTAHRIDPG WSGNIVLEFY NSGKLPLALR PKMKIGALSF EVLSAPAEKP YNARVDAKYK 
GQAGAVASRI SSDDQSK