| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01980 |
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| Symbol | |
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| ID | 6775458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2137643 |
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| End bp | 2139307 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642755416 |
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| Product | putative membrane-bound lytic murein transglycosylase |
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| Protein accession | YP_002126278 |
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| Protein GI | 196156789 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.531039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTGA AGTTTTTCCC ACTATCGCCG CTGATATTAG CGATAGGTTT AACGGGTTGT
CAGTTAACCG ATAATAATAA CGACAGTGCG CAATTAGAAA GTAACGAGAA CGCTTCATTA
GAAGCGTGTA GTGAAATTCA CAATACCGAA GAAGCCATTT CCGATTGCGA AATTGCAAGA
GACGGCGTTA TTGATGTTGT TCATCCTAAT GACGACGTCT TAGAAGAAGG TGCAGAACTT
ACCGATACGC CAGATTTACA CACGCAGGCC GTTGTCACTA ATGTGTGGGA ACGGGCCAGC
ACCAATTTTG CGCTGCCTAT TCCAGATGAA AAGCGGATAA GCTCGCAAAG AAAATGGTAT
CTAAAGCACC CCGAATACAT GGCCCGCGTA GTCAAGCGTG CCAAACCTTT TTTGTATTAC
ATTGTTGAAG AAATTGAAAA GCGCGACATG CCTATGGAGC TTGTGCTTTT ACCCATCGTA
GAAAGTGCGT TCGACCCTTT TGCCTACTCT CACGGACGTG CAGCGGGAAT GTGGCAGTTT
ATACCTGGCA CAGGCAAACG CTTCGGTATG CCTCAGAACT GGTGGTACGA TGGCCGCCGC
GACGTGGTTG CTTCTACAAA AGGGGCGTTA GACTACCTCA CATATCTAAA CGATATGTTC
GACGGAGACT GGCTTCATGC ACTTGCCGCG TACAATAGCG GTGAAGGCAG AGTGCAAAGA
GCGATTAAAG CGAATATACG GGCGGGTAAA CCTACTGACT TTTGGAATTT GAACTTACCG
AAAGAAACCC GTGCATACGT GCCAAAGCTG TTAGCCCTAG CCGACATTCT TAAAAACAAA
GACGAATATG CCTATTCATG GCCGGAAGTG GAAAACGTAG CGGTTATTGA AGTGGTAGAT
ATTGGTTCTC AGGTAGACCT TGCCTTTGCC GCAGACCTAG CCGGCATGTC GTTAAAAGAG
CTACATGCAC TCAACCCTGG CTTTAACCGT TGGGCCACAT CGCCAGATGG ACCACATAGG
CTTGTCTTAC CCTTAGTAAA AGCCGCCGCG TTTTCTCAAG CTCTGGCCAA AATCGATCAA
AAAGAGCGCC TAAACTGGGT TCGCCACACG GTGAAGTCAG GCGACAGCTT GAGTAAAATT
GCTAAGCAAT ACCACACTAC GGTGAAAGTG CTAAAAAGAA TTAACGAGCT GGATAGCTCT
ATGATTCGAG TGGGCCAAGC GATTATGGTA CCCGTTGCAC TGCAAGAACT CGATAGCTAC
ACGTTATCAC AGGAACAGCG CCTTGCCAGT TTGCAAAGTG GCAGTGGGTC TAAACAGAAA
GTACGCCATA CGGTTAAATC AGGTGATACG CTTTGGGATA TCGCCCGTAA GTACAAAATA
AGCACCAAAC AACTTGCTAA GTGGAACGGT ATGGCGCCTG GCGATATGCT TCATCCAGGT
AAAACATTAG TAATATGGCA ACAAGGAACG CCTCAAAACG GCGTTACCAA GAAGCTAACT
TACACGGTAA GAAATGGTGA CTCCTTGTCT CGTATTGCCA GCAAGTTCAA TGTTAAAGTA
AGCGACATAG GCAAGTGGAA CTCACTAAAT ACCAAACGTT ATTTACAGCC AGGCCAGAAG
CTTAAGCTTT ACGTAGATGT AACTAGGTCT AGCGCCTCAG GCTAA
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| Protein sequence | MQLKFFPLSP LILAIGLTGC QLTDNNNDSA QLESNENASL EACSEIHNTE EAISDCEIAR
DGVIDVVHPN DDVLEEGAEL TDTPDLHTQA VVTNVWERAS TNFALPIPDE KRISSQRKWY
LKHPEYMARV VKRAKPFLYY IVEEIEKRDM PMELVLLPIV ESAFDPFAYS HGRAAGMWQF
IPGTGKRFGM PQNWWYDGRR DVVASTKGAL DYLTYLNDMF DGDWLHALAA YNSGEGRVQR
AIKANIRAGK PTDFWNLNLP KETRAYVPKL LALADILKNK DEYAYSWPEV ENVAVIEVVD
IGSQVDLAFA ADLAGMSLKE LHALNPGFNR WATSPDGPHR LVLPLVKAAA FSQALAKIDQ
KERLNWVRHT VKSGDSLSKI AKQYHTTVKV LKRINELDSS MIRVGQAIMV PVALQELDSY
TLSQEQRLAS LQSGSGSKQK VRHTVKSGDT LWDIARKYKI STKQLAKWNG MAPGDMLHPG
KTLVIWQQGT PQNGVTKKLT YTVRNGDSLS RIASKFNVKV SDIGKWNSLN TKRYLQPGQK
LKLYVDVTRS SASG
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