| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01970 |
|---|
| Symbol | |
|---|
| ID | 6775520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2127565 |
|---|
| End bp | 2127987 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642755406 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_002126268 |
|---|
| Protein GI | 196156779 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAA GTTTAAAATC CGTAGACAGT ACCCCAGAGA ATGGTACTGT CGGCTCACTG
AGTACAGATG AAAATATCGA AAAACCGAGC GGAACAGTCA GCGAACCGAA GCAATATATT
TGTGGTGTTG CGGTGTCGCT AGAAATTATT GGCGGTAAGT GGAAAGGGGT GATCCTTTGG
CATCTTTGCC ATAAAACCCT TCGCTTTAGC CAGTTAAGGC GACGGCTTCA GGGGGTGACG
CAAAAAATGC TGACACAGCA ACTTAGAGAG TTAGAGCGAG ACGGGCTGGT AAATAGAAAG
GTGTATGCCG AAGTTCCGCC GCGGGTGGAG TATTCGCTAA CCGAATTAGG TCGCACTTTA
GAGCCAACCC TGCGTCAACT ATGCGATTGG GGAAGAACGT ATAATGACGA ACATAAACCG
TAA
|
|---|
| Protein sequence | MTASLKSVDS TPENGTVGSL STDENIEKPS GTVSEPKQYI CGVAVSLEII GGKWKGVILW
HLCHKTLRFS QLRRRLQGVT QKMLTQQLRE LERDGLVNRK VYAEVPPRVE YSLTELGRTL
EPTLRQLCDW GRTYNDEHKP
|
|---|
| |