Gene MADE_01955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01955 
Symbol 
ID6776099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp2108743 
End bp2109720 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content46% 
IMG OID642755391 
Product2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
Protein accessionYP_002126253 
Protein GI196156764 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGA TGAACTTACT ACAAGCTATC AATAACGCGC TCATCACAGC CATGACCGAC 
GATGAAAAAG TCATGGTTTT CGGTGAAGAT GTAGGCCATT TCGGCGGTGT TTTTCGTGCA 
ACGAGTCATC TACAAGAGAA GTTTGGTAAA GCCCGCTGTT TCAATACGCC GCTAACCGAA 
CAGGGCATCA TCGGATTTGC CAATGGTTTG GCATCCCAAG GCTCGGTGCC TGTGGCCGAA 
ATTCAGTTTG GTGATTATAT CTTTCCCGCT TTCGATCAAA TAGTAAACGA AACCGCAAAA 
TGGCGATATC GCTCTGGTGG ACAGTTCGAT GTGGGCACGT TAACTATTCG TACTCCTTAT 
GGTGGTGGGA TTGCTGGCGG TCATTACCAC AGTCAATCGC CGGAAGCCTT TTTTGCCCAT 
TGCCCGGGTT TGAAAATTGT AATCCCACGT AACCCTTACC AGGCCAAGGG GCTGTTACTG 
GCGTCAATCC GTGATAAAAA CCCGGTGTTG TTTATGGAGC CTAAGCGTTT GTACCGCGCT 
TCGGTGTCTG ATGTACCAGA AGAAGATTAT GAGTTGCCGT TAGGTAAAGC CGACATAGTA 
CAAGAAGGTA GCGATATTAC GTTACTAGGG TGGGGTGCTC AAATCGAAAT ACTGCAAAAA 
GCTGCTGAGA TGGCGTTAGA AGATGGCGTG TCATGCGAAA TAATCGACTT GCGCAGTATT 
TTACCGTGGG ATGCTGAAAC CGTTATGCAG TCGGTAATGA AAACAGGACG ATTACTGGTT 
AACCATGAAG CACCGCTTAC AGGGGGCTTT GCTAGCGAAA TAGCTGCAAC CATACAAGAA 
CGCTGTTTCT TGTACCTTGA AGCACCTATA GCTAGGGTCT GTGGTCTTGA TACGCCATAT 
CCATTGGCAC ATGAAAAAGA ATATATGCCA GATGAAACTA AAACCTACGA AGCAATTAAG 
CGTACGCTTC ATTATTAA
 
Protein sequence
MAKMNLLQAI NNALITAMTD DEKVMVFGED VGHFGGVFRA TSHLQEKFGK ARCFNTPLTE 
QGIIGFANGL ASQGSVPVAE IQFGDYIFPA FDQIVNETAK WRYRSGGQFD VGTLTIRTPY 
GGGIAGGHYH SQSPEAFFAH CPGLKIVIPR NPYQAKGLLL ASIRDKNPVL FMEPKRLYRA 
SVSDVPEEDY ELPLGKADIV QEGSDITLLG WGAQIEILQK AAEMALEDGV SCEIIDLRSI 
LPWDAETVMQ SVMKTGRLLV NHEAPLTGGF ASEIAATIQE RCFLYLEAPI ARVCGLDTPY 
PLAHEKEYMP DETKTYEAIK RTLHY