| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01948 |
|---|
| Symbol | |
|---|
| ID | 6776020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2097338 |
|---|
| End bp | 2098768 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642755384 |
|---|
| Product | P-aminobenzoate synthetase, component I |
|---|
| Protein accession | YP_002126246 |
|---|
| Protein GI | 196156757 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0147] Anthranilate/para-aminobenzoate synthases component I |
|---|
| TIGRFAM ID | [TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0024318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGCT ATACGAAAGA AGCGCTCTTA AATATTGTTG GTTTACATCA CAACACACAT
GAGCCATTCA ATACGCTTTT TGAACAGGTG GCATCGCTAC CTTATTCCCT TCTGCTTGAC
ACATCAGGCT CTTTAAAAAG TGATGGTCGT TACAACATAA TGGCATTTTC GCCTGTATCC
GTTATTGAAG CTAAGGGCGA TGAAGTAACC TTGGTGGATG TCTCTACGTC GATGCGTGAG
GCCCTTCTGC AGCGCCCTTT CGAGGCCGTC GAACAACACT TGCACTCACA GTTAAATAAT
GTAGTAATAA ATGCAGATGC AGACTTCGAT ACATCCCACC TACCCTTTAT CGTTGGTGTG
GCGGGCATGG CGGGTTATGA CACAGGGCGT TTCTATGAAG CATTGCCAAG TGTTGCGAAA
GCCGACTACG CGACGCCTGA CTTTACCGTT GGGCTATACT TACGTTCGCT TATCGAAGAT
ACCCAAACTG GCCATATCTA CTACTGCTCA GTAGATAACG CCCCCTTAAC ATCATTTTTT
GCTGCCCCTG ACAGCAGTAA AAAAGTTGCC ACTGATACTG TGCCTTCAGA TTTCAAGTTA
ACAACGCCGT TTACATCAAA CCTGTCTAAG CATGAGTATA AAAAAAGTTT AGCCACCATC
GAGGGCTATC TGCGTGCTGG GGACTGTTAC CAAGTTAATA TGGCGCAACG TTTTACTGCA
TCATATGAAG GTAATATTTG GCAAGCGTAC TGTGAACTAC GCAATCAAAA CCAAGCGCCG
TTCTCTGCGT ATTTCAACCT GCCGGACGGC TGTATTGCTT CTATTTCACC GGAGCGGTTT
TTGCGGGTTA AGGATGGCAT AGTTGAAACT AAGCCGATTA AGGGCACGCG TCCACGATTT
AAGAACCCGT TAAAGGATAA AGCGAGTGCT GATAGTCTGC TATCAGCAGA AAAGGATCGC
TCTGAAAACC TGATGATTGT CGATTTGCTG CGAAACGACA TTTCGAAGCA CTGTAAGCCC
CATTCGGTAA AAGTACCTGC ACTCTTTGCC CTTGAAAGCT ATGAAGCGGT TCATCATTTA
GTCAGTACGG TTACCGGAGA GCTAAACGAA ACCGCCTCAC CACTTGAGTT GTTAGCGGCA
GCCTTTCCCG GCGGCTCTAT TACTGGCGCC CCTAAAATTC GTGCAATGGA AGTCATTGAT
GAACTAGAGC CACACCGACG TAATATTTAT TGCGGTAGTG TTTTTTACAT GGGTTACCGT
GAGGACATGG ACTCAAGCAT TTGTATTAGA ACAGTATTGG CAGAGAATAA CCGATTACAT
TGTTGGGCCG GCGGTGGTAT TGTTTTAGAT TCAGTACCCA CTGAAGAATA CCAAGAAACC
CTCGACAAAG TCTCGAAGAT ACTGCCGGTA CTTGAATCGA TAAACCAATA A
|
|---|
| Protein sequence | MSRYTKEALL NIVGLHHNTH EPFNTLFEQV ASLPYSLLLD TSGSLKSDGR YNIMAFSPVS
VIEAKGDEVT LVDVSTSMRE ALLQRPFEAV EQHLHSQLNN VVINADADFD TSHLPFIVGV
AGMAGYDTGR FYEALPSVAK ADYATPDFTV GLYLRSLIED TQTGHIYYCS VDNAPLTSFF
AAPDSSKKVA TDTVPSDFKL TTPFTSNLSK HEYKKSLATI EGYLRAGDCY QVNMAQRFTA
SYEGNIWQAY CELRNQNQAP FSAYFNLPDG CIASISPERF LRVKDGIVET KPIKGTRPRF
KNPLKDKASA DSLLSAEKDR SENLMIVDLL RNDISKHCKP HSVKVPALFA LESYEAVHHL
VSTVTGELNE TASPLELLAA AFPGGSITGA PKIRAMEVID ELEPHRRNIY CGSVFYMGYR
EDMDSSICIR TVLAENNRLH CWAGGGIVLD SVPTEEYQET LDKVSKILPV LESINQ
|
|---|
| |