Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01896 |
Symbol | |
ID | 6776129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2044685 |
End bp | 2045707 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642755332 |
Product | putative periplasmic protease |
Protein accession | YP_002126194 |
Protein GI | 196156705 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000105224 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGAGTTTT TGTACGAATA CGGTTTGTTT GTTGCCAAAG CAGTAACACT CGTCGTTGCT TTTATCGTGG TTGTATCAAC CATTGTCGGT GTGGCAAGTA AGCAGAAGCA GGGGAAAGGC CAACTTGAAA TCGTGTCTAT TTCTGAACAG TTAAAAGACA TAACGAATTA TGCAAAGCAG GTACTTTTAG ATAAGAACGC GCTTAAAAAA CTGGCAAAGG AACAAAAGAA AGAAGCTAAG GCAAAAAATA AAGAAAAGGG CGAAGACGCG AACAAGTCCC GCTTATACGT CCTCGACTTT AAAGGCTCGA TGGACGCAAA CGAAGTTGAA CATTTACGTG AAGAAGTTAC CGCTATTCTT TGTGTTGCCA ATAAAGAGGA CGAAGTGTTA GTTCGCCTTG AAAGTGGCGG CGGTGTGGTA CACGGGTACG GACTTGCAGC ATCACAGCTT CAGCGTATTA AAGAAAAAGG CCTTAAGTTA ACTATCGCTG TGGATAAAGT AGCGGCGAGT GGCGGCTATA TGATGGCGTG TGTTGCTGAT AAATTACTTG CTTCTCAGTT TGCTTATATT GGCAGTATTG GCGTTTTGGC GCAGCTTCCT AACTTCAATA AATTGCTCAA GAAGAATGAC ATTGAGTTTG AGCAACACAC CGCCGGTGAA TTTAAACGAA CGCTGACGAT CTTTGGTGAA AATAACGACG AAGGTCGTGC CAAATTTAAA GAAGAAATTG AAGAAATTCA TGTTCTTTTT AAAGACTTTG TTCAAAGTCA ACGCCCTGAT ATGAACATTG ACAAAGTCGC TACAGGTGAG TACTGGCCTG GTATCAAAGC TAAGACGCTA GGTTTGGTCG ACGAGATAAC CACATCAGAT GATTATATTC TCTCTCATTA TCCAGCACGG GAAATATTTA GCGTTAAATA TTCAGTGAAG AAGAACGTCG CTGAAAAGCT AGGTATGTCA GCAGCAAGCG TTGTTGAAAG GGTATTTATG AAATCAATGA GCAAAGCGCG TCACTGGTTT TAA
|
Protein sequence | MEFLYEYGLF VAKAVTLVVA FIVVVSTIVG VASKQKQGKG QLEIVSISEQ LKDITNYAKQ VLLDKNALKK LAKEQKKEAK AKNKEKGEDA NKSRLYVLDF KGSMDANEVE HLREEVTAIL CVANKEDEVL VRLESGGGVV HGYGLAASQL QRIKEKGLKL TIAVDKVAAS GGYMMACVAD KLLASQFAYI GSIGVLAQLP NFNKLLKKND IEFEQHTAGE FKRTLTIFGE NNDEGRAKFK EEIEEIHVLF KDFVQSQRPD MNIDKVATGE YWPGIKAKTL GLVDEITTSD DYILSHYPAR EIFSVKYSVK KNVAEKLGMS AASVVERVFM KSMSKARHWF
|
| |