| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01874 |
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| Symbol | |
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| ID | 6775713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2004196 |
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| End bp | 2004906 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755310 |
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| Product | succinate dehydrogenase catalytic subunit |
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| Protein accession | YP_002126172 |
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| Protein GI | 196156683 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000253868 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAATTAA CTTTTTCGAT TTATCGTTAT AACCCAGAAG TAGATGCGAA GCCTCGCATG
CAAGACTACA CTCTAGAAGT AGAGGAAGGT CAAGACATGA TGGTGCTAGA TGCGCTACTT
GCACTTAAAG AGCAGGATCC GACGCTTTCT TTCCGTCGCT CATGCCGCGA AGGTGTATGT
GGTTCTGACG GTGTAAACAT GAACGGCAAA AACGGCCTAG CATGTATTAC TCCACTTTCT
GCGCTGGGCA AAGGCAAAAT AGTCGTTCGT CCACTTCCAG GTCTACCTGT TGTACGTGAC
CTTGTTGTTG ATATGACGCA GTTCTATACA CAGTACGAAA AGATTAAGCC TTTCTTAATT
AACGACAGCA AGCAGCCGCC GGCTCGTGAG CACCTTCAGT CACCTGAAGA GCGCGCTAAG
TTAGATGGTT TATATGAGTG TATCTTATGT GCATGCTGTT CGACGTCTTG CCCATCATTT
TGGTGGAACC CTGACAAGTT TATCGGTCCG GCCGGTCTAC TTCACGCTTA TCGATTCTTA
ATTGATAGCC GTGACACTGC GACAGAAGAG CGTCTTAACG ATCTTGACGA TGCATTCAGC
GTATTCCGCT GTCACGGTAT CATGAACTGT GTAAGTGTAT GTCCTAAAGG ATTGAACCCA
ACAAAAGCTA TTGGCCAAAT CAAGTCAATG CTTTTACAAC GGGCTGTTTA G
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| Protein sequence | MQLTFSIYRY NPEVDAKPRM QDYTLEVEEG QDMMVLDALL ALKEQDPTLS FRRSCREGVC
GSDGVNMNGK NGLACITPLS ALGKGKIVVR PLPGLPVVRD LVVDMTQFYT QYEKIKPFLI
NDSKQPPARE HLQSPEERAK LDGLYECILC ACCSTSCPSF WWNPDKFIGP AGLLHAYRFL
IDSRDTATEE RLNDLDDAFS VFRCHGIMNC VSVCPKGLNP TKAIGQIKSM LLQRAV
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