Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01870 |
Symbol | |
ID | 6776024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1999710 |
End bp | 2000987 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642755306 |
Product | Citrate synthase |
Protein accession | YP_002126168 |
Protein GI | 196156679 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGATC AGAAAGCCAT TCTTAAAGCC GGCGGTAAGG AAATCGAGCT TCCTATCTTG TCTGGCACTG AAGGACAAGA TGTAATCGAC GTCCGTACGG TAGGCCAACA CGGTTATTTC ACGTACGACC CAGGTTTTAT GGCGACAGGA TCTTGCGAGT CTTCAATTAC CTACATTGAT GGCGCTCAAG GTGTATTATT ACACCGCGGT TTCCCTATTG AAGAACTAGC GCGTGACGCA GACTATCTTG AAGTTTGTCA CATGCTTCTT CACGGTGATG CACCAACAAA AGAACAGTAC GAAGAATTCA AAGAGACAAT TACTCGTCAC ACCATGGTAC ATGAACAAAT TAACATGTTC TTCCACGGTT TCCGCAACGA CGCGCACCCT ATGGCAATGC TATGTGGTAC CGTTGGCGCT ATGTCTTCGT TCTATCACAG TGATTTAGAC GTTTCTAACG AAGAGCAGCG TATTCGCAGC GCTCACCGTC TAATTGCGAA AATGCCTACC CTTGTTGCTA TGTGTTATAA ATACAACATC GGTCAGCCTT TCGTATATCC ACGTAACGAC CTAAGCTATG CAGCTAACTT CCTGAACATG ATGTTCTCTG TACCTGCAGA AGAATTTCAA ATCAGCCCTG CTGTAGAGCG TGCGATGGAC CGTATCTTTA CCCTTCACGC TGACCACGAG CAAAACGCGT CTACCTCAAC GGTACGCCTT GCTGGTTCGT CTGGCGCTAA CCCTTACGCG TGTATTGCGG CAGGTGTTGC GTCACTTTGG GGACCTGCTC ACGGTGGTGC AAACGAAGCA TGTCTTAACA TGCTAGAAGA AATCGGTACA GTTGACCGCA TTCCTGAGTT TATTGCTCGT GCTAAAGACA AGAATGACCC GTTCCGTCTG ATGGGCTTCG GTCACCGTGT TTATAAAAAC CACGACCCAC GTGCTACAGT AATGCGTGAA AGCTGCCACG AAGTATTGAG CGAACTTAAC GTGAAAGACC CACTGCTAGA AGTAGCAATG GAACTTGAAA AAATTGCGTT GAGCGACCCT TACTTCGCAG AGAAGAAACT GTTCCCGAAC GTAGACTTCT ACTCAGGTAT CGTACTAAAA GCCATTGGTA TTCCTACAAA CATGTTCACC TGTATCTTCG CCCTGTCTCG TACAGTAGGC TGGATTTCTC ACTGGCATGA AATGATGAGC GACCCTAAGC AAAAAATTGG TCGTCCTCGT CAGTTATACA CTGGTCACAG CCAGCGTAAG TACACGCCAA TCAAGTAA
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Protein sequence | MADQKAILKA GGKEIELPIL SGTEGQDVID VRTVGQHGYF TYDPGFMATG SCESSITYID GAQGVLLHRG FPIEELARDA DYLEVCHMLL HGDAPTKEQY EEFKETITRH TMVHEQINMF FHGFRNDAHP MAMLCGTVGA MSSFYHSDLD VSNEEQRIRS AHRLIAKMPT LVAMCYKYNI GQPFVYPRND LSYAANFLNM MFSVPAEEFQ ISPAVERAMD RIFTLHADHE QNASTSTVRL AGSSGANPYA CIAAGVASLW GPAHGGANEA CLNMLEEIGT VDRIPEFIAR AKDKNDPFRL MGFGHRVYKN HDPRATVMRE SCHEVLSELN VKDPLLEVAM ELEKIALSDP YFAEKKLFPN VDFYSGIVLK AIGIPTNMFT CIFALSRTVG WISHWHEMMS DPKQKIGRPR QLYTGHSQRK YTPIK
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