Gene MADE_01844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01844 
Symbol 
ID6775906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1971449 
End bp1971922 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID642755280 
ProductCytidine deaminase 
Protein accessionYP_002126142 
Protein GI196156653 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0295] Cytidine deaminase 
TIGRFAM ID[TIGR01354] cytidine deaminase, homotetrameric 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.595326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCCAA CCTTCTCGCA TTTGATGATA AAAGTAAAGC GTAATGGGCG GTTAACACAG 
GTAGCTATGA AGAAAAATAA TATAGAAAAA CTATCACAAC TTGCTTTTGA CGCACAGAAA
AACTCTCACT CTCCTTATTC TAACTTTAAA GTGGGTGCAG CAGTGTTAAC GCCTAGTGGA
GAAACCTTCG CGGGCTGTAA TGTAGAAAGT GCGGCTTTTC CGTTAGGCCA GTGCGCCGAG
GCCACCGCCA TTGGCAATAT GGTTACACAA GGCCAGAAGC GTATAACACA CATCGTTATT
GCCAGCCCTA ACAATGAATT TTGTTTTCCC TGCGGCGGTT GCAGACAAAA AATCGCTGAG
TTCGCGCCAG ATGAAACCCC GGTAACCATG GTTAGTCAAA GTGGAGAGAA GTTTGAAACC
ACCATCGGCG AATTGCTTCC CAATGCCTTT AGGGCGCACG ATTTAGACAA GTAA
 
Protein sequence
MPPTFSHLMI KVKRNGRLTQ VAMKKNNIEK LSQLAFDAQK NSHSPYSNFK VGAAVLTPSG 
ETFAGCNVES AAFPLGQCAE ATAIGNMVTQ GQKRITHIVI ASPNNEFCFP CGGCRQKIAE
FAPDETPVTM VSQSGEKFET TIGELLPNAF RAHDLDK