Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01844 |
Symbol | |
ID | 6775906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1971449 |
End bp | 1971922 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642755280 |
Product | Cytidine deaminase |
Protein accession | YP_002126142 |
Protein GI | 196156653 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0295] Cytidine deaminase |
TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.595326 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCCAA CCTTCTCGCA TTTGATGATA AAAGTAAAGC GTAATGGGCG GTTAACACAG GTAGCTATGA AGAAAAATAA TATAGAAAAA CTATCACAAC TTGCTTTTGA CGCACAGAAA AACTCTCACT CTCCTTATTC TAACTTTAAA GTGGGTGCAG CAGTGTTAAC GCCTAGTGGA GAAACCTTCG CGGGCTGTAA TGTAGAAAGT GCGGCTTTTC CGTTAGGCCA GTGCGCCGAG GCCACCGCCA TTGGCAATAT GGTTACACAA GGCCAGAAGC GTATAACACA CATCGTTATT GCCAGCCCTA ACAATGAATT TTGTTTTCCC TGCGGCGGTT GCAGACAAAA AATCGCTGAG TTCGCGCCAG ATGAAACCCC GGTAACCATG GTTAGTCAAA GTGGAGAGAA GTTTGAAACC ACCATCGGCG AATTGCTTCC CAATGCCTTT AGGGCGCACG ATTTAGACAA GTAA
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Protein sequence | MPPTFSHLMI KVKRNGRLTQ VAMKKNNIEK LSQLAFDAQK NSHSPYSNFK VGAAVLTPSG ETFAGCNVES AAFPLGQCAE ATAIGNMVTQ GQKRITHIVI ASPNNEFCFP CGGCRQKIAE FAPDETPVTM VSQSGEKFET TIGELLPNAF RAHDLDK
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