| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01817 |
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| Symbol | |
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| ID | 6775342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1953245 |
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| End bp | 1954306 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642755253 |
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| Product | Polynucleotide phosphorylase |
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| Protein accession | YP_002126115 |
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| Protein GI | 196156626 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00061601 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCTA CTCTAGGTAC AGAGCGTGAC GCACAGATGA TTGACGAGCT TCAAGGTAAG
CGCGACAGCC GTTTCATGCT TCACTACAAC TTCCCTCCAT ACTGTGTTGG TGAAACCGGT
ATGATTGGTT CGCCTAAGCG TCGTGAAATT GGTCACGGTC GTCTAGCGAA GCGTGGTATT
CAAGCAGTAA TGCCAAGTGA AGAAGAATTC CCGTACGTAG TACGTGTGGT TTCTGAAATC
ACAGAATCAA ACGGTTCATC TTCAATGGCG TCGGTATGTG GTACTTCACT AGCGCTTATG
GATGCGGGTG TTCCAATTAA AGCGTCTGTT GCGGGTATCG CAATGGGCCT AGTTAAGAGT
GACGACAACT TTGTTGTACT TTCAGACATC CTTGGTGACG AAGATCACCT TGGCGACATG
GACTTTAAAG TAGCGGGTAC TACCGACGGT ATTACTGCAC TTCAAATGGA CATTAAGATT
GAAGGTATTA CTAAAGAAAT CATGCAAATT GCGCTTAAAC AAGCAAAAGA AGCACGTTTG
CACATTCTTA ACGTAATGGA CGAAGCAATT GGCGGTCACC GTGAAGAGCT AAGTGAATTT
GCTCCACGCA TTTACACAAT GAAGATTGAC CAAGACAAGA TTCGTGACGT TATCGGTAAA
GGCGGCGCAA TGATCCGTCA AATTACTGAA GAGTCTGACA CTAACATCGA GATTGAAGAC
GACGGTACTA TCAAAATTTT CGCTACAGAG CGTGCGAAAG CAGACATCGC TATTGGCAAG
ATTGAGCAAG TAACGGCTGA AATTGAAGTT GGTAAGACTT ACAACGGTAA GATTACACGT
ATTGTAGACT TCGGTGCGTT CGTAGAAGTA CTTCCAGGTA AAGAAGGTCT TGTTCACATT
TCACAAATCG CTCACGAGCG TGTGAACAAG GTTACTGACT ACCTTAAAGA AGGTGAAATG
GTTGACGTTA AGGTTATGGA AATCGACCGC CAAAACCGTG TACGTTTAAG CATTAAAGAG
CTTCTAGAAA AGCCTGCGCC TAAGTCTGAC GACGCAGAGT AA
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| Protein sequence | MAATLGTERD AQMIDELQGK RDSRFMLHYN FPPYCVGETG MIGSPKRREI GHGRLAKRGI
QAVMPSEEEF PYVVRVVSEI TESNGSSSMA SVCGTSLALM DAGVPIKASV AGIAMGLVKS
DDNFVVLSDI LGDEDHLGDM DFKVAGTTDG ITALQMDIKI EGITKEIMQI ALKQAKEARL
HILNVMDEAI GGHREELSEF APRIYTMKID QDKIRDVIGK GGAMIRQITE ESDTNIEIED
DGTIKIFATE RAKADIAIGK IEQVTAEIEV GKTYNGKITR IVDFGAFVEV LPGKEGLVHI
SQIAHERVNK VTDYLKEGEM VDVKVMEIDR QNRVRLSIKE LLEKPAPKSD DAE
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