| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01762 |
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| Symbol | |
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| ID | 6775613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1895343 |
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| End bp | 1896314 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755198 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002126060 |
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| Protein GI | 196156571 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0258018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGAC GTCGTAAAGG CCGTGATATT AACGGCATAG TATTGCTTGA TAAACCACTT
GGTGGTTCTT CGAATCAGCT TCTTCAAAAA GTGCGTTGGC TTTATAAAGC AGCCAAGGCG
GGTCACACAG GAGCGCTTGA TCCTCTCGCT AGTGGTATGC TGCCTTTGTG TCTTGGTGAG
GCGACTAAGT TTTCTCAGTT TCTGCTCGAT GCTGAGAAAA CGTATGAAGT TACGGCGCAG
CTAGGGGTGC GTACAACCAC CTCTGACGCA GACGGCGAAG TTGTTGAAGA AAAGCCCGTC
AATGTTAGCG AAGAGCAAGT CCGCGACGCA TGCCTTGCTT TTTTAGGTAA AAGCAAACAA
ATCCCGTCTA TGTTTTCTGC ACTCAAACAT CAAGGTAAGC CGCTGTATTA TTATGCCCGA
CAGGGGATTG AAATAGAGCG AGAGCCCCGT GATATTGAAG TCTTTGAGCT TGACGTGTTG
CGCATTGAGC TTCCTTACGT GGATATGCGA ATAAAATGCA GCAAAGGCAC GTATATACGT
TCAATCGTTG ATGACTTAGG GCAAAACTTA GGATGCGGTG CCTACGTTAC CCGTTTACAT
CGTACTGAAG TGGCCGATTA TCCTACGGAT AAAATGGTAT CGCTTGAAAA GTTAATTGAA
ATCCAGGAGT CACTAGACGA CGGTGAGTTT AAAGCACTTG ATGACTTGCT CATTCCTATG
GACACCGCAG TAAGTCGTCT GCCGTTTGTG ACTATCAACG ACGCTGAAAG AAATCGCTTT
GATAATGGAC AATCGGTTAA AGGAGAGTGT AGCGAGCCAC TTAGTGAGGG CACGTCTTAT
CGTGTTTATC ACGGTGTTGA TACCAACGGC ATCTTCCTTG GCGTAGGGGA AGGGGTACTT
GACCCAAAAG ATCAGGGTAT ACCCAAGCAA GAAATATTCG TTAACCCGAA ACGTCGCGTT
GTTTATAGTT AG
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| Protein sequence | MARRRKGRDI NGIVLLDKPL GGSSNQLLQK VRWLYKAAKA GHTGALDPLA SGMLPLCLGE
ATKFSQFLLD AEKTYEVTAQ LGVRTTTSDA DGEVVEEKPV NVSEEQVRDA CLAFLGKSKQ
IPSMFSALKH QGKPLYYYAR QGIEIEREPR DIEVFELDVL RIELPYVDMR IKCSKGTYIR
SIVDDLGQNL GCGAYVTRLH RTEVADYPTD KMVSLEKLIE IQESLDDGEF KALDDLLIPM
DTAVSRLPFV TINDAERNRF DNGQSVKGEC SEPLSEGTSY RVYHGVDTNG IFLGVGEGVL
DPKDQGIPKQ EIFVNPKRRV VYS
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