| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01752 |
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| Symbol | |
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| ID | 6776322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1880219 |
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| End bp | 1881205 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642755185 |
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| Product | putative mechanosensitive channel protein (MscS family) |
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| Protein accession | YP_002126050 |
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| Protein GI | 196156561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.249612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTTC CGAAAGTAGA CGAGGTATAT AAGCTTTTAA GTGAAAAGTT AGAAAGCTGG
ATAGAGGGTG GCATTACCCT ACTACCAAAT ATAGTCGTCG CATTTCTTAT TGCTATTGTA
TTTGGGGTCA TAGCTAAAGT TGTGGGCAAC GTCGCAGGTA AACTAATGCG ACGTACGTTT
GAGTCCCGAC AAATTGCTGG CCTTCTTACC TCTATTATTA AAGCGATTGT ACTTGTTGCC
GGCATTTTCA TTGCTCTAGA TTTCGTCGGT CTTAAAGGCA CTGTTACATC ACTACTTGCA
GGTGCTGGTA TTGTAGGGTT AGCGATTGGT TTTGCTTTTC AAGACATGAC AGAAAACTTC
ATTGCTGGCG TAGCAATGGG TATTAGAAAG CCCTTTGATA TTGGTGATGT TATTGAAGCT
GAAGGGGTGT TTGGAAATGT TAAGGAAATA AACCTTAGAA ATACGTTGGT GGAAACCTTT
TACGGCCAGC TAGAGGTTAT TCCAAACAAA ATTTTGTTCC GCAACATCCT GACTAATTAT
TCGTATTTAG GTTACCGAAG AATAGAAGTG CCTGTGGGTA TATCCTACGC CGACGATATT
GAACAAGCCG CTAAAGTGAT TACGGATGCG ATGAACGAAA AGGACTACGT TATCAAGAAA
GAAGAAACCG CGGTGTATGC CGAGTCTTTT GGCGATTCTA GTATTAATCT TCTGCTGTGG
TTTTGGATTC GATATCCGGG AGAGCCGGGC TTTATGGTAG TTCGTCACGA TGCCATTACC
ACGGTTAAAA CGGTGCTTGA AGATAATGAC ATACTGATAC CGTTCCCAAT CAGAACGCTG
GATTTTAATG CCAAGGGCAG CGATAAACTA AACACCATGC TTAGCGATCG AAATGAATCG
AAAGCAAGTA ACCATAGTTC AACCTCGCCG CAGTCTTCTG CTGGCGAAAA GGCGAGCGAC
GGGTCAAGTC ACGCCGATGA AGAGTAA
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| Protein sequence | MEFPKVDEVY KLLSEKLESW IEGGITLLPN IVVAFLIAIV FGVIAKVVGN VAGKLMRRTF
ESRQIAGLLT SIIKAIVLVA GIFIALDFVG LKGTVTSLLA GAGIVGLAIG FAFQDMTENF
IAGVAMGIRK PFDIGDVIEA EGVFGNVKEI NLRNTLVETF YGQLEVIPNK ILFRNILTNY
SYLGYRRIEV PVGISYADDI EQAAKVITDA MNEKDYVIKK EETAVYAESF GDSSINLLLW
FWIRYPGEPG FMVVRHDAIT TVKTVLEDND ILIPFPIRTL DFNAKGSDKL NTMLSDRNES
KASNHSSTSP QSSAGEKASD GSSHADEE
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