Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01689 |
Symbol | |
ID | 6776326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1811380 |
End bp | 1812177 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642755122 |
Product | cytochrome c assembly protein |
Protein accession | YP_002125987 |
Protein GI | 196156498 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000413644 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCC TTTTCGCCAT CTCTGCTGCC CTACTCTATG CTCTCGCTGC TGCAGTGCTT ATTGGCAAAT TCGTACATCA AGACGGCCCC AATAAGCGTT TAGGGTTGTC ACTTGCAAGT CTAGGCGCAA TAGCGCATAT CGCATTTCTA ACCAATGTTA TTATTGTGGC CCCTGGCCAA GACATGAGCG TTACTAACGT ACTGTCACTG GTTTCTTGGA TAATAACCAT ATCCATGTTG GTATTTGCAC GGGCTATTCC AAACCTTATT TTGCTTCCCG TTGTTTTTGG TTTTGCAAGT TTGACGGTGT TGGCATCACA GTTCATTCCC GTGTCTTACA TTATGCACAT TGAGCTGCAG CCCGGGTTAG TTATCCATAT TAGTTTGTCG CTTTTTGCTT ACTGTACTTT GGTGATTGCA TTTCTTTATG CCCTGCAAAT GTCTTACATC ACTTACAGGT TAAAGCAAAA AGGCGCAGCC CTATTACACT CTTCGTTGCC GCCATTAATG CTGGTAGAAA ACATCCTATT TAAACTTCTA CTTGCCGGAA CATCACTATT AACTGTGTCG CTAATCAGCG GTTTTGTGTT TTTAGAAGAT ATGTTTAATA AAACTTACGC ACACAAAACC GTGCTTTCTG CTGCTGCTCT TGTGGTGTTT CTTATTCTAT TAGTTGGGCA AAAGCTTCGA GGTTGGCGTG GTAAGCAGGT TATAGCACTA ACCGTTTTGG GCGTTGCGCT ATTGTCGCTA GCTTACTTCG GTAGCAAGTT AGTTCGCGAG TTTTTATTGT CAGCATGA
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Protein sequence | MNTLFAISAA LLYALAAAVL IGKFVHQDGP NKRLGLSLAS LGAIAHIAFL TNVIIVAPGQ DMSVTNVLSL VSWIITISML VFARAIPNLI LLPVVFGFAS LTVLASQFIP VSYIMHIELQ PGLVIHISLS LFAYCTLVIA FLYALQMSYI TYRLKQKGAA LLHSSLPPLM LVENILFKLL LAGTSLLTVS LISGFVFLED MFNKTYAHKT VLSAAALVVF LILLVGQKLR GWRGKQVIAL TVLGVALLSL AYFGSKLVRE FLLSA
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