| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01685 |
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| Symbol | |
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| ID | 6776510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1805832 |
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| End bp | 1808021 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642755117 |
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| Product | predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| Protein accession | YP_002125983 |
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| Protein GI | 196156494 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAAA ATATCGAACA CGATATCCAG TTAGCAGAAA AGGTCTTTGA TAAAGTTGTT
TCTGACAGGC AAACCGTAAT TAAAAGTGTG TCAAAAGTGC TTTCTCGTTC ATTTGATTTC
AGACGGGCCG TGGGAACAGG TAGCATTCCC TCAATTGAAG CCGCCTTTAC CAGTTATGCA
GACAGGCTAA ATACCGACAT TATTGCACTA GTCAGTTTAG ACCATCAGGT TGTTGCTTCA
CACACCGAGC TTTTCAAAGA AGGGCAAAAT GTTCAAAGTA GCTTAGCCTT AGTTGCCAAG
GGTAAAGATA GCGGTTTATT TGTCGTAGAT AATAAATTAG TTCAGCTTAA TCTCATTCGT
GTAGAAATCC CTACACTTAG ATACTACATG CTTATCGGTA TTGAATTCGA CAGTGTATTG
CTACAAGAAC TGAAAGAACT CGTCGATGCA GAAATCATAA TATCGCAGCT CGATTCAAAT
CGTATACTTA AAACCACATT AAAGGAACAC GAGGCTAAGC GAGTCCTTGC ATCACAACGA
GATCCTTCTT GGGTCGATGT AACGTTCAAA AATCAACTTA CTTACGTAAC GCGCCAAGTC
TATTTAGGAA GCGAAGAAAC CTTACCGGTT AAGATTACTC TAGCCGTTGA TACCACTTCC
TCTTTTGAGG CCTTTACCGG CGTGCAGCTC ACTATCTTCG CCTTCTCTAT TTTAGCGATA
TTGATTGCAC TTGGTTTGTC ACTATTGCTT GCACGAAGCG TGAGTCAGCC GGTATCTACA
TTAGTAAAAG CGGTTAATAA GGTGGCCTCG GGTAAATATG GTGCCACACT AAAAACCCCC
TCAAAGCTTA AAGAAATTAC CGAACTCGCC AATGCAGTAG ACAGCATGCA GGCCAGTATT
AAGAGCCGAG AAAAGCACAT TCGCTATCAG GCTGAACACG ATGTATTAAC AGGGCTTTTT
AACCGTAACT ATGTGGAAGG CTATTTTGAG TCTGAGTTAG GAAGTGGGCA CTCTGTTCAG
GTTGTGGCAA TCACGGTTAT TGGTTTTAGA ACCATTAACG ATCTTTATGG CTATTCTAAT
GGTGATAACA CATTAAAAGC CCTTGCTGAA AGGTTACAGC GTTGGCCCGG TACTTCAGCC
CGTCTAGCTG GCGGAGAAAT TCTTTACATT ACACACGACG CACTCAATGA TGATCAGCTT
GAAACCCTCA AGCACATTTT AGAGCAGCCG GTAGAAAGTA ATTTAATCGC TATTCCGGTA
AAGGTAGCTA TGGCTGTAAT TGATTGCCCT AAAGATGCCT CGTCTTCTGA AGAATTGTTT
AGAAAAATGA ATATCGTGAC AGACGAAGCG ATACACAGCG ACAGTTGGTG TGTTCGTTAC
AAAGCCGATC TGGAAGATAA ATACACCAGA AGGCTGTCTA TTACTACTGA GTTAAAGCGC
GCGTTAATCA GTCAGCAAAA TGAATTATCT ATGGTTTATC AGCCTAAAAT TGATTTACAA
ACCATGAAAG TATGCAGTAT GGAAGCGCTC ATTCGTTGGA ACAACAGCGT ACTTGGGTTT
GTTCCTCCCG ATGAGTTTAT TACCATTGCT GAACAAGCAG GTTTGATAGA GCAGGTTACA
TCATGGGTGA TGAAGCAAAC CATTTCTGAC TTGGCTTACT TCAGAGAAAA GGGCTATGGC
TTTACGGTAG CCATGAATTT ATCTACCCAG GATATTCAAA ATAAGGTGCT GTTAACTAAA
CTTGTCTCGC TACTTACCGA AGAGGGCTTG TCGCCTGAAG CCCTTGAGCT TGAGATAACC
GAAAGCGATC TGGTGGCAGA CGCATCACTT GCGATTGAGA ACTTAAACGA GTTAACCGCC
CGTGGTTTTC ATTTTGCCAT CGATGACTTT GGTACGGGTT ACTCTTCACT GGCTTATTTG
AAAAACTTGC CAGTAAAAAC CATTAAAATA GACAAGAGTT TTATACTGTC GCTTGCCAGT
GATGAAAACG ACCAGCAAAT TGTCCGCACG GTTCTTAGCT TAGCTAATGT CTTTAACTTG
AAAGTAGTTG CCGAAGGTGT AGAAGATGCC GCATCGTTAG ACATTCTTAA AGAATGGGGA
TGTGACATAG TACAAGGCTA CTACATCAGC CGCCCATTGA GTTGCGCTGA CTTAGAAAGT
TGGCTTCAAA ATACGCCTTT CGGAGAATAG
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| Protein sequence | MVKNIEHDIQ LAEKVFDKVV SDRQTVIKSV SKVLSRSFDF RRAVGTGSIP SIEAAFTSYA
DRLNTDIIAL VSLDHQVVAS HTELFKEGQN VQSSLALVAK GKDSGLFVVD NKLVQLNLIR
VEIPTLRYYM LIGIEFDSVL LQELKELVDA EIIISQLDSN RILKTTLKEH EAKRVLASQR
DPSWVDVTFK NQLTYVTRQV YLGSEETLPV KITLAVDTTS SFEAFTGVQL TIFAFSILAI
LIALGLSLLL ARSVSQPVST LVKAVNKVAS GKYGATLKTP SKLKEITELA NAVDSMQASI
KSREKHIRYQ AEHDVLTGLF NRNYVEGYFE SELGSGHSVQ VVAITVIGFR TINDLYGYSN
GDNTLKALAE RLQRWPGTSA RLAGGEILYI THDALNDDQL ETLKHILEQP VESNLIAIPV
KVAMAVIDCP KDASSSEELF RKMNIVTDEA IHSDSWCVRY KADLEDKYTR RLSITTELKR
ALISQQNELS MVYQPKIDLQ TMKVCSMEAL IRWNNSVLGF VPPDEFITIA EQAGLIEQVT
SWVMKQTISD LAYFREKGYG FTVAMNLSTQ DIQNKVLLTK LVSLLTEEGL SPEALELEIT
ESDLVADASL AIENLNELTA RGFHFAIDDF GTGYSSLAYL KNLPVKTIKI DKSFILSLAS
DENDQQIVRT VLSLANVFNL KVVAEGVEDA ASLDILKEWG CDIVQGYYIS RPLSCADLES
WLQNTPFGE
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