Gene MADE_01652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01652 
Symbol 
ID6778872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1773299 
End bp1774483 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content45% 
IMG OID642755084 
ProductD-alanyl-D-alanine carboxypeptidase 
Protein accessionYP_002125950 
Protein GI196156461 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000184002 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGAA TAATTCAACG CGCTAAACCG TCATTACTTT CATTTGCCTT TTTGGTGTTA 
GGGACATTGT TACATACAGC CAGTGCTGCT GTAGTCACTC CGCCTGCTCC ATCAGTCGCT
GCAGAAGGTT TCTTACTTAC CGACTATGAA ACAGGTCACG TCATCGCGTC GAAAAACGCA
GATATGCAGC TTGCACCAGC AAGTTTAACA AAGATCATGA CCATTTATGT GATTGGTAAA
GAACTTCAAG CGGGCAATAT TAGCCTAGAT GATGAAGTTA CCATTTCTGA AAATGCATGG
GCTAAGAAAT TCCCAGATTC TTCAAAAATG TTTATTGAAG TGGGCACGCA AGTTTCCGTT
AGCGACCTAC TGCGCGGCAT TGTAGTGCAA TCAGGTAACG ATGCCTGCGT TGCTATGGCT
GAACATGTTG CAGGTTCGGA ATCTGCATTT GCAAGCATGA TGAACGCTCA CAGCGCCTCG
TTGGGTATGA CAGCCTCTCA TTGGGTAAAT GCTCACGGAT TACATGATCC TGACCACTAC
ACCACCCCTC GTGACATGGC TATTCTTTCT CGTGCACTTA TTGCCGAGAC ACCTGAAATG
TATAAAATTT ACAGTGAAAA AGAATTTACC TACAACGGTA TTAAACAGTA CAACCGCAAT
AGCTTACTGT GGGATAAAAG CTTAAATGTT GACGGTATCA AGACGGGCCA CACCTCAGAT
GCAGGCTACA GCCTAATTAC ATCTGCTGAG CAAGGCGGCA TGCGCCTAAT TTCTGTGGTA
ATGGGTACTG ATAGCGAACG TGCACGTAAA GTAGAAAACA AAAAACTACT TAAATACGGC
TTCCGCTTTT ACGAAACGCT TACCCCTTAT CAAGCGGGAC ACAGTTTTGT CGCCCACCGC
ATTTACATGG GTGATAGAGA AACGGTAGAC CTTGGAATTA ATCAATCTAC CCCCATTACT
ATTCCTCGCG GTCAAGCGGC GAATTTGGAA GCTAACTTTG AGTTAGACGA CAAACTGGAA
GCCCCGCTAG CTAAAGGTCA AGTAGTCGGT AAGCTATACC TACAGCTAGA AGGTGAAGAC
GTGGCAAGTT ACCCACTGGT AACCCTTCAA GAAGTAAAAG AAGGTAGCTT CTTCAACCGC
GCCAAAGACT ACATTATGCT TCAGCTAGGC TTTGACGACG AGTAA
 
Protein sequence
MLRIIQRAKP SLLSFAFLVL GTLLHTASAA VVTPPAPSVA AEGFLLTDYE TGHVIASKNA 
DMQLAPASLT KIMTIYVIGK ELQAGNISLD DEVTISENAW AKKFPDSSKM FIEVGTQVSV
SDLLRGIVVQ SGNDACVAMA EHVAGSESAF ASMMNAHSAS LGMTASHWVN AHGLHDPDHY
TTPRDMAILS RALIAETPEM YKIYSEKEFT YNGIKQYNRN SLLWDKSLNV DGIKTGHTSD
AGYSLITSAE QGGMRLISVV MGTDSERARK VENKKLLKYG FRFYETLTPY QAGHSFVAHR
IYMGDRETVD LGINQSTPIT IPRGQAANLE ANFELDDKLE APLAKGQVVG KLYLQLEGED
VASYPLVTLQ EVKEGSFFNR AKDYIMLQLG FDDE