Gene MADE_01627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01627 
Symbol 
ID6778526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1744059 
End bp1744760 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content45% 
IMG OID642755059 
Product5-methylthioadenosine/S-adenosylhomocysteine nucleosidase 
Protein accessionYP_002125925 
Protein GI196156436 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTGGTATTTT AGGTGCAATG GACGAAGAAG TAGCGCTACT TAAAGCGTCT 
CTTTGGAATG TGAAAGAAAC AAAGTGGAAG CACCTTACGT TTTATGAAGG CACACTAAAC
GATATGGAAG TGGTGTTAGT AAAATGCGGT ATTGGTAAAG TTGCTGCGGC TATCGCGACT
ACCGTACTTA TTGAGCAATT TGCGCCAGAT GCAGTCGTTA ACACCGGATC CGCAGGTGGC
TTCGACAAGA ATTTAAACAT TGGTGATTTA GTGATAGCAA GTCACGTTAT TCACCACGAT
GCAGACCTTA CCCATTTCGG TTACAAATTA GGGCAGTGTG CTGGCATGCC AGAGGATTTC
CGCTGTGATA CTCACTTAAT GGAAACCGCG CGTACCGCGG CTGCAAGCAT TGTCTCGCTG
CAATCTACAA CGGGTTTAAT TTGTACCGGC GATGCGTTTA TCGGTAGCGA TGAAGCAGTG
GCAGAACTAC GTGAAAACTT CCCTGATATG AAAGCGGTAG AAATGGAAGG CGCAGCAATA
GGCCAAACTT GTCACATGCT CGACACGCCG TTCCTTGTTA TTCGCTCGCT GTCGGATATC
GCAGGAAAAA CGTCATCTGT AAGCTTTAAA GAGTATTTAG AGACTGCCGC TAAGCATTCA
GCACAGCTTG TAATGGCAAT GATAAAGACC CTCGCTAAGT AA
 
Protein sequence
MKKIGILGAM DEEVALLKAS LWNVKETKWK HLTFYEGTLN DMEVVLVKCG IGKVAAAIAT 
TVLIEQFAPD AVVNTGSAGG FDKNLNIGDL VIASHVIHHD ADLTHFGYKL GQCAGMPEDF
RCDTHLMETA RTAAASIVSL QSTTGLICTG DAFIGSDEAV AELRENFPDM KAVEMEGAAI
GQTCHMLDTP FLVIRSLSDI AGKTSSVSFK EYLETAAKHS AQLVMAMIKT LAK