| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01615 |
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| Symbol | |
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| ID | 6777905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 1731439 |
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| End bp | 1732761 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642755047 |
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| Product | regulator of pathogenicity factors |
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| Protein accession | YP_002125913 |
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| Protein GI | 196156424 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00130056 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGAA AACCTACGCG AATTAAAAAT ACCGGAGGCT TTCAGCAAAA CCTGAGTGCA
GCTTTACTAT CAACCACTCT TTTGGTGTCT GGCACAGCCC AGGCCGACCA AGGCAAGTGG
CAAGATGCTT TCGACTTTCA AGCAAGCTAC ACCGGGGAAT CGGCAACTAA CGTCGAAGGC
GGTGAGCGCA GAGGCAGTGC ATACGCAGGG CAGCTTTTTG TAGGAGGGGA GCTCGATCTA
AATACCCTGT TCAACTGGGA AGATACAAAA ATTCATGTTG CGATGACCAA CCGACACGGT
AAAAATTTAG CAGAACATTA TATTGGTAAC AGTACGTCGG TACAGGAAAT CTTTGGCGGT
CAAAACACCC GCCTCGCTCG GTTCACCATT GCCTCGACCT TTTTGGATGG CGATTTAGAA
CTGGAAGGCG GCCGTACCGT AGCTAATATT AGTTTCTTAG GATCTGAACT GTGTCAGTAT
TTTCAGACCA ACGCGGCATG CGGAAACCCT ACTTTTGTAT TTAGAACCAG TAACTTTACT
TGGTGGCCTG TGTCTAGCTG GGGTGGTCAC GCAAAATATT GGCTATCATC AAACACGTAT
TTCCACACGG GTATTTATGA AGATAACACA AGCCATCAGG ACTTAGGCGA CCATGGTTTT
GACTGGGCTA CGAATGAAGC CACAGGCGTT GTTGTCCCTT TTACGCTAGG CTACCAGACA
ACGTGGGATA ACGATGCGTT ACCAAGAAGA TATGAAATTG GCGGCTGGTA TGACGGTGCT
GACTACACCG ACCCAGTTTT TGACGAGCAA GGAAATTATG CCGCCTTATC GGGAAATGAC
TACGCCGTTC GAAATGGTCG CTCCGGTGTG TTTGCTCGCT TCGAGCAGAC CGTCACTCGC
CCCAACCCGT CCACTAAAGA AGGGTTAACC TTATTTGGCG CTGTGCTTAC CGGCACGTCG
GGGGAACTGA TTGAAGACTA TTATCTTAAA GCGGGTTTAG TAATGCGCGG AACGCTTGCT
TCTCGACCTA ACGATACTGT TGGATTCGTC TTCACCCGAC AGCAGTACAC CGATGAGGCC
TTAGAAGACC AACGTATATT GCGAGCGATG AATGGCGGTG TGGGCACCCC ACCGAGTAGT
CAAACAATGT TGGAGTTGAG CTACGGTTAT CAGTTAAACC AACACGTTCG CATTCAGCCA
AATGTACACT ATATTATTAA CCCCGATCAG TTCGCAGAAC GCGACAGAGT TAGCGAGCTT
GATGATGCGA TTGTATTGGG CCTAAGGTTT GACGTAAATC TTGCGGGTCT TCTCATACAA
TAG
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| Protein sequence | MMRKPTRIKN TGGFQQNLSA ALLSTTLLVS GTAQADQGKW QDAFDFQASY TGESATNVEG
GERRGSAYAG QLFVGGELDL NTLFNWEDTK IHVAMTNRHG KNLAEHYIGN STSVQEIFGG
QNTRLARFTI ASTFLDGDLE LEGGRTVANI SFLGSELCQY FQTNAACGNP TFVFRTSNFT
WWPVSSWGGH AKYWLSSNTY FHTGIYEDNT SHQDLGDHGF DWATNEATGV VVPFTLGYQT
TWDNDALPRR YEIGGWYDGA DYTDPVFDEQ GNYAALSGND YAVRNGRSGV FARFEQTVTR
PNPSTKEGLT LFGAVLTGTS GELIEDYYLK AGLVMRGTLA SRPNDTVGFV FTRQQYTDEA
LEDQRILRAM NGGVGTPPSS QTMLELSYGY QLNQHVRIQP NVHYIINPDQ FAERDRVSEL
DDAIVLGLRF DVNLAGLLIQ
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