Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01575 |
Symbol | |
ID | 6775278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1687085 |
End bp | 1688185 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642755007 |
Product | permease YjgP/YjgQ |
Protein accession | YP_002125873 |
Protein GI | 196156384 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.154727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATAT TCCGCTATTT ACTTAAGGAA ACGCTGAAAT CTCAGTTAGC GATTTTCTTC ATCCTAATGG CCATTTTTGT CACCCTGAGG TTTGTGCGCG TTTTAGGCGA CGCATCAGAC GGTGATATCC CTGCTGGCCT AGTACTTGGC TTCCTAGGCT TATACGCCCC TATTCTCTCA TCATTGGTAC TGCCCATCAG CGCTTATTTG GGGATCATGT TGGCGCACGG TAGGCTGTAT GTAGACAGTG AAATGACCGT GATGCGCGCC TGCGGCATTA GCGAATGGTA TGTCACGCGA GTGATGCTGT TCTTGTCGGT ACTTATTATG ATTGTGACCG GCGCTATTAC CCTTTATTTC GCGCCGCTGG CTGCCGAGAA CGAATATCAA CTGCGCGAAA AAGCCCGTAA CGAAGCGGGT ATCTCCGCGC TTATGCCGGG TCGCTTCCAG CAAACGGGTA ACGAAAAAGC GGTTATCTTT GTCCACGATG TAGACAAGAA CGACAAGCTT CAACGGGTGT TTCTATCGCA AAACCAAACC AGCGATAGCG AAGGTGATGT GCGCGTAGTT TACGCCCAAA CCGGCGAAGT GGCGAGCAAC CCCGATGGCA CCCGAAACCT TGTTTTGAAG CAAGGCGTGC AGTACGAAGG TATACAGTCT GAAAAGGCCT ACCGCAAAGT TGAATTTGAT GAATACCAAA TTCAAATTGC CGATAAGCCT GCTGATGAAA CCCGTCGTAA GGTAAGCGTG CTGCCCACCA GCGAACTGTG GGAAGACGAC AGTATTGAAG CCAGAGCAGA GCTTCAATGG CGAATTGCTA TTCCGCTGTC GATTCCATTT TTAATACTTA TTGCGGTACC ACTTAGCGCC GTCGACCCTC GACAGGGGCG ATTTGGCAAG ATGTTCCCCG CCATTTTGTT GTACTTGGGC TATTTCTTAC TGTTGTTGGC CAGCAGACGT GTACTGGAAG ACGGAAAGAT GCCGCCCCAA CTAGGACTGT GGTGGGTACA TACCATTATG TTGATTATAG GCATTACGCT TATCGTGCGA GATAGGAAAA CTGGCACGCA GTTACGCGCA TGGATATTGG GGAAGAAATA A
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Protein sequence | MLIFRYLLKE TLKSQLAIFF ILMAIFVTLR FVRVLGDASD GDIPAGLVLG FLGLYAPILS SLVLPISAYL GIMLAHGRLY VDSEMTVMRA CGISEWYVTR VMLFLSVLIM IVTGAITLYF APLAAENEYQ LREKARNEAG ISALMPGRFQ QTGNEKAVIF VHDVDKNDKL QRVFLSQNQT SDSEGDVRVV YAQTGEVASN PDGTRNLVLK QGVQYEGIQS EKAYRKVEFD EYQIQIADKP ADETRRKVSV LPTSELWEDD SIEARAELQW RIAIPLSIPF LILIAVPLSA VDPRQGRFGK MFPAILLYLG YFLLLLASRR VLEDGKMPPQ LGLWWVHTIM LIIGITLIVR DRKTGTQLRA WILGKK
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