Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01462 |
Symbol | |
ID | 6775810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1569603 |
End bp | 1570304 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642754900 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_002125767 |
Protein GI | 196156278 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTATA ATATTCACAG CGGAATAGGT AGAGACAAAA AGCAAGATTA CAAACGCATT GGGCAGTTTC TCGCAAGCAG CGGTGCCGAT GTCGTGTTGC TGCAGGAAAT GGACACCCGC CCTCCCGAGC GAGATACCGC ACAAGATGTT AGAGACATAT GTGCCGAAAA TACCTTTAAG CTTATACCTT CGCCAGCCAT CAGAGAAGCT GATGGCTGGT ATGGCAACGC TATACTCACT CGCTACGACG TTTTATCAAA CGACACGGTT GATGTAAGCC AAAGCGGGCG ACAACCGAGA AATGTGCAAA TTGTCGAATT AAAAACAGAG AAAACGCCGC TTACTGTCGT GAATACGCAT AAGGGACTAA AAAAACTGGA GCGGCGCTCA CAGTTCTCTT TGCTTCATGA GCACCTTTCT CAGCGTCTCA AGGAAAAGCA AACCCCGTTA GTACTGGCTG GAGATTTCAA TGAATGGCAG TTTTTTTCTA AAGCATTTAA AGGTTTGAAT TCTTTGCTTT TTCAACAAAA AGTCGGCGCT ACATTTCCTA GCCATTTCCC CGTCTTTTCG TTAGATAGAG TTTGGGTTAC CGATGATATA AAAGTTAAAG CCTGTAGGAA GCTTAAGAAT GCTAAAACCA GAGTATATTC CGATCATCTG CCTGTGCTTA TCGATATAGA ATTGCCTGAA TCTCCTGACT AA
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Protein sequence | MTYNIHSGIG RDKKQDYKRI GQFLASSGAD VVLLQEMDTR PPERDTAQDV RDICAENTFK LIPSPAIREA DGWYGNAILT RYDVLSNDTV DVSQSGRQPR NVQIVELKTE KTPLTVVNTH KGLKKLERRS QFSLLHEHLS QRLKEKQTPL VLAGDFNEWQ FFSKAFKGLN SLLFQQKVGA TFPSHFPVFS LDRVWVTDDI KVKACRKLKN AKTRVYSDHL PVLIDIELPE SPD
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