| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01448 |
|---|
| Symbol | |
|---|
| ID | 6778630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1547493 |
|---|
| End bp | 1548290 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642754883 |
|---|
| Product | CDP-diacylglycerol--serine O-phosphatidyltransferase, putative |
|---|
| Protein accession | YP_002125753 |
|---|
| Protein GI | 196156264 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1183] Phosphatidylserine synthase |
|---|
| TIGRFAM ID | [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00567188 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAC AAAAACGTAA AGGGATATAC TTACTTCCCA ATTTATTAAC AACAGCAGGT
TTGTTTTCAG GTTTCTTCGC TGTTGTGTCG TCTATGAACG GCCGCTTCGA AGCTGCCGCT
GTTGCTATAT TTGTAGCTAT GATTTTTGAT GGCCTCGATG GTCGTGTAGC ACGAATGACA
AATACGCAAA GTGACTTTGG TGCTGAATAT GACTCTATGG CCGACATGGT TTCATTTGGT
ATGGCGCCAG CACTCGTGGC TTATAACTGG GGGTTAACAG AGCTTGGTAA ATTGGGCTGG
TTAGCCGCTT TCGTCTATGT GGCGGGCGCA GCACTTCGTC TTGCACGCTT TAATACGCAG
GTGGGAATAG CTGACAAACG TTTCTTCCAA GGTCTTGCTA GCCCAGCTGC TGCGGCAGTT
GTTTCCGGGC TTGTATGGGT TGGCGTAGAA TACGATGCGG TTGGTACTGA CTACGGCTTA
TTAGTTGCAG CAGTTACAGG CCTAGCTGGC CTCCTTATGG TGAGTAACTT CAAATATAAC
TCCTTTAAAG AAGTTAACTG GCATGGCAAA GTTCCTTTTG TAGGTCTATT GCTGGTGCTT
CTCATATTTG TCGTTGTTGC AACCGAGCCA GCACTGGTAC TTTTCTTAGT ATTTGCACTT
TATGCGCTGG CAGGTCCAAT TAATACATTT AGAACCGTTG ATAAAGTAAC GTTAGATGAT
GTAGTAGGCG ATCACGAAGA AGACGCGGAT TTTAAAGGTG ATGCTAAGCG GGAAGATGAG
CATCAAGAAA ATAAGTAG
|
|---|
| Protein sequence | MSEQKRKGIY LLPNLLTTAG LFSGFFAVVS SMNGRFEAAA VAIFVAMIFD GLDGRVARMT
NTQSDFGAEY DSMADMVSFG MAPALVAYNW GLTELGKLGW LAAFVYVAGA ALRLARFNTQ
VGIADKRFFQ GLASPAAAAV VSGLVWVGVE YDAVGTDYGL LVAAVTGLAG LLMVSNFKYN
SFKEVNWHGK VPFVGLLLVL LIFVVVATEP ALVLFLVFAL YALAGPINTF RTVDKVTLDD
VVGDHEEDAD FKGDAKREDE HQENK
|
|---|
| |