Gene MADE_01420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01420 
Symbol 
ID6779159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp1519054 
End bp1520154 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content47% 
IMG OID642754855 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative 
Protein accessionYP_002125725 
Protein GI196156236 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00401415 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTA ACACTACACA AGAAATAATT GAAGATATCC GCCAAGGTAA AATGGTTATC 
TTAATGGATG ATGAGGACCG AGAGAATGAA GGTGACCTCA TCATGGCGGC AGAGCATGTG 
ACGCCTGAAG CCATAAACTT TATGGTTACT CACGCACGGG GCTTGGTATG TTTGCCTATG 
ACGCAAGAGC GTTGTCGTGC GCTAAATCTT CCGTTAATGG TAGATAAAAA CGAAGCCCAG 
TTCTCTACGA ACTTTACTGT TTCTATCGAG GCGGCAACGG GTGTAACCAC GGGCATTTCA 
GCGGCAGACC GCGCCACGAC AATTAAAGCT GCTGTAGCGA AAGAGGCGAA AGCCACAGAC 
ATCGTACAGC CGGGTCATAT TTTTCCACTT ATTGCTAAAG ATGGCGGTGT ATTAAACCGT 
GCGGGTCATA CCGAAGCTGG CGTTGATTTA CCCCGTTTAG CGGGTTTAGA ACCGGCGGGC 
GTTATTGTAG AAATTCTTAA TGAAGACGGC ACTATGGCCC GTCGCCCAGA GTTGGAAAAG 
TTTGCAGCTA AACACAACCT TAAAATTGGT ACTATTGCCG ATCTAATTGA ATACCGTAAC 
CTAAACGAAA CGACGATTCA AAAAGTGGCG CAGTGCAACA TGCCGACCGA GTATGGTGAC 
TTTGAGTTAC ATACCTTTAA AGACAGTATT GATAACCAGC TTCACTTTGC CCTTAAGAAA 
GGTGAGATAA AAGAAGATGA AGCGACGCTT GTGCGTGTAC ACCTTCACAA TACGTTTAGT 
GATCTTCTTG GCTCTACCCG CGGTATTCAT CGCTCAATGA CATTAGCAGA CGGCATGCGC 
AAAATCTCAG AAGAAGGTGG AGTGTTAGTG CTATTAGGTA AAGAAGAGCA CATCGAAAGC 
CAGGTACGCC GCTTTGCAGC CGAAGATAGA GGCGAACAAC CTGCTGGCGC TGATTGGCAG 
GGATCGTCGC GCACAATTGG TGTGGGTAGC CAAATTCTTG CGTCTATGGG CGTTCACAAA 
ATGCGTCTTC TTAGCAAGCC AATTAAATAT CATGCGCTTT CAGGTTACGG CCTAGAAGTG 
GTCGAGTACG TGCACGACTA G
 
Protein sequence
MAFNTTQEII EDIRQGKMVI LMDDEDRENE GDLIMAAEHV TPEAINFMVT HARGLVCLPM 
TQERCRALNL PLMVDKNEAQ FSTNFTVSIE AATGVTTGIS AADRATTIKA AVAKEAKATD 
IVQPGHIFPL IAKDGGVLNR AGHTEAGVDL PRLAGLEPAG VIVEILNEDG TMARRPELEK 
FAAKHNLKIG TIADLIEYRN LNETTIQKVA QCNMPTEYGD FELHTFKDSI DNQLHFALKK 
GEIKEDEATL VRVHLHNTFS DLLGSTRGIH RSMTLADGMR KISEEGGVLV LLGKEEHIES 
QVRRFAAEDR GEQPAGADWQ GSSRTIGVGS QILASMGVHK MRLLSKPIKY HALSGYGLEV 
VEYVHD