Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01419 |
Symbol | |
ID | 6776815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1518371 |
End bp | 1519033 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642754854 |
Product | riboflavin synthase subunit alpha |
Protein accession | YP_002125724 |
Protein GI | 196156235 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000127826 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACTG GAATTATTCA AGCGTTAGGC ACGATTAAAA AGCTCGATAA CCGTGGCAAT GATATTCGTC TAACGGTGTC TTCACCTACG CTTGATATGT CTGATGTAGC GCTAGGCGAC AGTATCGCTA CCAACGGTGT TTGTTTAACA GTCACTGATA TGGGGGCTGA TTATTACTGT GCAGATGTGT CGGCAGAGAC GATTAAATTA ACTGGCTTTG CACATTACAG CGCTGGCTCA ACGGTTAATT TAGAAAAAGC CATGCGCCCA ACCGATCGCT TTGGCGGTCA CATTGTGTCT GGTCACGTGG ACGGCGTTGG TGAAGTTACG CAAATCATTA AACATTCAGA CTATGTAGAA TTCTGGGTTA AAGCGCCCGA AGCGATTGCC AAATATATTG CTCATAAAGG CAGCATTACG GTTGATGGAA TCAGTCTTAC CGTTAACGAG GTGAATGGCG CTGAGTTCAT GCTTTGGATC ATTCCCCATA CGTTACAAGA AACGATAATG GGAAGCTATA AAGTAGGTAC TGCAGTTAAT TTAGAAGTTG ATGTTATTGC GCGCTACTTA GAGCGATTAA TGCTGGGCGA TAAAGCCGCC GAGCCACAGA GCAAAGGCAT CGATATGGCA TTTCTTGCCG AGAACGGATT TTTAAGAAAA TAA
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Protein sequence | MFTGIIQALG TIKKLDNRGN DIRLTVSSPT LDMSDVALGD SIATNGVCLT VTDMGADYYC ADVSAETIKL TGFAHYSAGS TVNLEKAMRP TDRFGGHIVS GHVDGVGEVT QIIKHSDYVE FWVKAPEAIA KYIAHKGSIT VDGISLTVNE VNGAEFMLWI IPHTLQETIM GSYKVGTAVN LEVDVIARYL ERLMLGDKAA EPQSKGIDMA FLAENGFLRK
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