Gene MADE_01355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01355 
Symbol 
ID6776977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp1454070 
End bp1454555 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content49% 
IMG OID642754792 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_002125663 
Protein GI196156174 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0210581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCA CTTCTAAAGG GCGCTATGCG GTTACCGCAA TGCTTGATGT CGCTTTGCAT 
TCAAAGCGTG GTCCAGTGCC TCTTGCCGAC ATTTCAGAAC GACAAGAAAT CTCTTTATCT 
TATCTTGAGC AGCTGTTTTC TCGCTTGCGC AAAGAGCAGT TAGTCGACAG TGTTCGCGGC 
CCCGGCGGCG GCTACCTATT GGGTCGAGAA GCGAGCGAGA TAGCCATAGG TGAGGTGATC 
CGCGCAGTAG ATGAGTCTAT CGATGCGACG CGCTGCCAAG GGCAGGCCGA TTGCCAAGGC 
GGTGATCGTT GTCTAACCCA TAGTCTGTGG CAAGATTTAA GTGACCGCAT TGCGGCGTTT 
TTAAATTCAA TTACCTTAGG TGAATTAATG GCAAAGCGGG ATGTACAAGA AGTAGCGGGT 
CGTCAAGACG GCAATGCATC ACTTCGTCAT ATCACCAAAG ATATTGAAGT AAGTATTCAA 
CTTTAA
 
Protein sequence
MKLTSKGRYA VTAMLDVALH SKRGPVPLAD ISERQEISLS YLEQLFSRLR KEQLVDSVRG 
PGGGYLLGRE ASEIAIGEVI RAVDESIDAT RCQGQADCQG GDRCLTHSLW QDLSDRIAAF 
LNSITLGELM AKRDVQEVAG RQDGNASLRH ITKDIEVSIQ L