| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01344 |
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| Symbol | |
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| ID | 6776971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 1441609 |
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| End bp | 1442655 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642754781 |
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| Product | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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| Protein accession | YP_002125652 |
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| Protein GI | 196156163 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
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| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0537708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAT CTGATTTTAG CTTTGTTCTA CCCGAAAACC TTATTGCCAA ATATCCAACG
CAACAGCGCA CTGCCAGTCG TTTGCTACAT TTAGACGGTA AAAACGGCAA GGTTGAACAT
ACCATGTTTG CAGACATGCT TAAATTTGTA GAGCCGGGTG ATTTACTGGT TTTTAATAAC
ACCCGTGTTA TACCTGCGCG CCTTTTAGGT AAAAAAGAAA CCGGCGGTCA AGTGGAGGTG
CTCATTGAGC GCATTACATC TGACACCACC GCACTTGCCC ATGTGCGCGC AAGCAAAGCG
CCGAAACCGG GTACTAAGCT CATTCTAGAA GAAAAAGTGA ATGTAACTGT TACCGGTCGA
GACGACGCAC TGTTTATACT GCAGTTTGAC CACGATGAAA CCGTATTAAC GCTGCTGGAA
GCCCACGGTC ATATGCCGTT ACCGCCTTAT ATCGACCGTC CGGATGAAAA CTCGGATAAA
GAGCGTTACC AAACGGTGTA CAACGAAAAG CCTGGTGCTG TAGCGGCACC TACCGCAGGG
TTACATTTTG ACGACAGTAT TTTAAACGCG TTAAAAGAAA AGGGGGTTAA CCTAGCCTTC
GTTACCTTGC ATGTAGGCGC GGGCACGTTT CAGCCCGTTC GTGTTGATAA TATTCAAGAG
CATAAAATGC ACGCTGAATT CGCCGAAGTG CCTCAAGATG TGGTTGATGC CGTGTTAAAT
ACAAAAGCAA ATGGCAAAAG GGTAATTGCA GTAGGGACCA CTTCGGTACG CTCACTAGAG
TCGGCGGCGA AAGCGAGTGC AGAGCGGGGC GATGAACAGA TTATCGCGCC CTTTAATGAA
GATACCGAAA TCTTTATTTA CCCTGGTTTT GAATTTAAAG TTGTGGACGC TATGTTTACT
AACTTCCATT TACCGGAATC TACGTTAATG ATGTTGATTA GCGCATTTGC AGGTAAAGAA
AACGTGATGA ATGCCTATCA AGAAGCGATA GCGAAAGAAT ACCGATTCTT TAGCTATGGC
GATGCTATGT TTATTGAGCG CGCTTAA
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| Protein sequence | MKLSDFSFVL PENLIAKYPT QQRTASRLLH LDGKNGKVEH TMFADMLKFV EPGDLLVFNN
TRVIPARLLG KKETGGQVEV LIERITSDTT ALAHVRASKA PKPGTKLILE EKVNVTVTGR
DDALFILQFD HDETVLTLLE AHGHMPLPPY IDRPDENSDK ERYQTVYNEK PGAVAAPTAG
LHFDDSILNA LKEKGVNLAF VTLHVGAGTF QPVRVDNIQE HKMHAEFAEV PQDVVDAVLN
TKANGKRVIA VGTTSVRSLE SAAKASAERG DEQIIAPFNE DTEIFIYPGF EFKVVDAMFT
NFHLPESTLM MLISAFAGKE NVMNAYQEAI AKEYRFFSYG DAMFIERA
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