Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01252 |
Symbol | |
ID | 6775785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1345925 |
End bp | 1348117 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642754689 |
Product | glycogen branching enzyme |
Protein accession | YP_002125560 |
Protein GI | 196156071 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.369495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTTAG CGCAGCAGTT CGAACAAGTA ACATGTTCCC AACCATTTTC TCATCTTGGC GTCATTGCCA GTCAACAAGG TGCAATGCTT CGTGTTTGGT GTCCTGACGC CAGCGAAGTA ACGATTAAAT GGGAGAATTC TGCGCTAGCT GATCGAGTTA TTAAATCGGA CAATGCGAAT GGCTTATTTG AAGCGTCACT TCCCGCTGAG TACAACGGTG AAATTTACCG CGTAGTCGCT AATAAGGGGA GAGGGGATAA TGGTTATATC GACCCTTATC AATTTACTGA ACAGGCTTAC CATGCCGTAC ATTATATCGA TAGCACGCCA GCAAATTTGT ACGAACAAGC GGGTGCGCAG TTAATTGATA TCTCTACACC ACAGGGCAAG ACGGTAAGTG GCGTGAGGTT TTGTGTATTT GCGCCAAATG CAAGCGCGGT ATCACTCATT GGCGATTTCA ACCAGTGGGA CGGACGTACT CACCCGATGG AGAAAACGTC GATGGGGTAT TGGGTGCTCT TCGTACCCGA GCTCACTGAA GGCGAACGCT ATAAATATCA TATCAAAGAC GCCAATGGTC ATGATTTACC GCATAAAGCT GACCCCTTAG GATTCTGTGC TGAGCAGTAT CCTTCTCATG CGTCGAAAAT TTATAATCAC CGTTCCTACC AGTGGAGCGA TAGTGATTGG ATGGAAAATC GCAAGGGGGA TAAATACGCC AGCCCTATGA GCATTTATGA GGTTCACTTA GGCTCATGGA AACGACCTGA CGCTGCTACA GAGGCGCGGT ATCTTACCTA TAAAGAACTT GCCGATGATT TGATTGGTTA CGTTAGCGAT ATGGGCTACA CCCATGTGGA ACTGCTACCA ATATCAGAGT TTCCTTTCGA CGGCTCGTGG GGATACCAAC CGGTAGGTAT GTTCGCGCCT ACCAGTCGGT TTGGCAATCC AGATGACTTC AAATACTTTG TCGATAAATG TCACCAAGCC GGCGTGGGCG TTATCATCGA TTGGGTACCT GCTCATTTTC CTGAAGATGG ACACGGTCTG GCAAGGTTTG ACGGTTCGTG TGTGTATGAA TATGAAGACC CTCGTAAAGG CTGGCACCCA GATTGGAACT CATGTATCTA TGACTTTGGC AAAGATACCG TTCGTCAATT TTTAGTTGCC AATGCTCTTT ACTGGCTTGA CAAGTTTCAC GTGGACGGAC TTCGGGTTGA TGCGGTAGCG TCTATGCTTT ATTTAGATTA CTCCCGCAAC GAAGGCGAGT GGATCCCGAA CGTTGACGGC GGTAATGAAA ATTACGAAGC GATAAGCCTG CTTAAATGGA TGAACGAGGA AGTATACAAG CACTTCCCAG ACGCTATGAC TATAGCGGAA GAGTCCACGT CATTTCCCAA AGTATCTCGC CCTGTTTTCG ACGGTGGCTT AGGCTTTGGC TTTAAATGGA ACATGGGCTG GATGCACGAC TCGCTGCACT ACATTGCAAA AGACCCTGCA TATCGGAATT ACCACCACGG TGATATCACG TTTAGCATGG TTTATGCCTT TGATGAAAAT TTTGTTTTAC CCATTTCCCA TGATGAAGTC GTACATGGTA AAGGCAGCAT GCTACATAAG ATGCCGGGCG ATGAGTGGCA ACAAGCCGCT AATTTGCGCT GTTACGCAGG TTTCATGTAT GGCCATCCAG GCAAGAAGCT TAACTTCATG GGTAACGAAC TGGCGCAAGC ACGGGAATGG AATCACGATA GCAGCTTAGA CTGGCACTTG CTTGACTTCG AAAAGCACGC AGGTATCCAA GCGCTGTATA AGGCGTTAAA CCATTTGTAC ACCTCCACCC CAGCCCTTTA TGAACAAGAT CATGACCCGG CGGGTTTTGC GTGGCTTGAT CACAGCAATG CGGATCAAAG CGTTGTGTCG TTTGTTCGCA CTTCAAAAGA TGCAAAGCAA AAAGTCTACG TGGTGTCTAA CTTTACGCCT GTCCCGCGCA AGAACTTTAG AATTGGTGTG GATGAAGCCT GCACGTTGAC GCTGGCGCTG AACACCGACG ATGGGGTTTA TTGGGGTAGC AACTACGAAG TCGTTGCCAA CACAACCGCA CAACTTGTTC CGTGGAATGA TCGTAGACAT TCAGTAGAGA TAACCTTACC GCCACTTGCT ACGGTGTTTT ACGTTGCTGA TTTGAGTGAA TAA
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Protein sequence | MHLAQQFEQV TCSQPFSHLG VIASQQGAML RVWCPDASEV TIKWENSALA DRVIKSDNAN GLFEASLPAE YNGEIYRVVA NKGRGDNGYI DPYQFTEQAY HAVHYIDSTP ANLYEQAGAQ LIDISTPQGK TVSGVRFCVF APNASAVSLI GDFNQWDGRT HPMEKTSMGY WVLFVPELTE GERYKYHIKD ANGHDLPHKA DPLGFCAEQY PSHASKIYNH RSYQWSDSDW MENRKGDKYA SPMSIYEVHL GSWKRPDAAT EARYLTYKEL ADDLIGYVSD MGYTHVELLP ISEFPFDGSW GYQPVGMFAP TSRFGNPDDF KYFVDKCHQA GVGVIIDWVP AHFPEDGHGL ARFDGSCVYE YEDPRKGWHP DWNSCIYDFG KDTVRQFLVA NALYWLDKFH VDGLRVDAVA SMLYLDYSRN EGEWIPNVDG GNENYEAISL LKWMNEEVYK HFPDAMTIAE ESTSFPKVSR PVFDGGLGFG FKWNMGWMHD SLHYIAKDPA YRNYHHGDIT FSMVYAFDEN FVLPISHDEV VHGKGSMLHK MPGDEWQQAA NLRCYAGFMY GHPGKKLNFM GNELAQAREW NHDSSLDWHL LDFEKHAGIQ ALYKALNHLY TSTPALYEQD HDPAGFAWLD HSNADQSVVS FVRTSKDAKQ KVYVVSNFTP VPRKNFRIGV DEACTLTLAL NTDDGVYWGS NYEVVANTTA QLVPWNDRRH SVEITLPPLA TVFYVADLSE
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