Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01248 |
Symbol | |
ID | 6777952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1340468 |
End bp | 1341112 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642754685 |
Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
Protein accession | YP_002125556 |
Protein GI | 196156067 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.62764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCGA AATGGAAAAC CTCTCCAGAG GAAATTTTTG CGGCCGGCCC AGTTGTACCT GTGTTGGTTA TCAATGACGT AGAAAAAGCG GTACCTCTGG CGAAAGCGCT AATGGAAGGT GGTATCAAAG TGCTAGAAGT AACCTTACGT ACACCAGCGG CCATTGACGT GATTAAGCGA ATTGCCGATG AAGTGCCTGA TTCTTTAATC GGTGCAGGTA CGGTAACTAA TGCACAACAG CTAAAAGCTG TTGTTGAAGC CGGTGCTAAG TTTGCTATCA GCCCGGGAAT GACTGCAGAC CTGCTTAAAG CGGGTATGGA TGCGGATATT CCTCTCATTC CGGGTATTTC TTCAACGTCT GACCTGATGA AGGGTAAAGA TGCGGGTTAT ACTCACATGA AATTCTTCCC TGCAGAAGCA TCAGGTGGCG TAAAGGCGAT TAAGTCTATC AGTGGCCCTT TCCCTGATGT GACATTCTGC CCAACAGGCG GTATTGGTCC GAACAACTAC AACGATTACC TAGCGCTTAA AAACGTGAAG TGCGTAGGTG GTTCGTGGTT AGCACCTGAT GATGCAATCG AGTCAGGTGA CTGGGCGCGT ATCACTCAAC TGGCTAAAGA AGCCGTTGCT GGTGCTAAGC AATAA
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Protein sequence | MTSKWKTSPE EIFAAGPVVP VLVINDVEKA VPLAKALMEG GIKVLEVTLR TPAAIDVIKR IADEVPDSLI GAGTVTNAQQ LKAVVEAGAK FAISPGMTAD LLKAGMDADI PLIPGISSTS DLMKGKDAGY THMKFFPAEA SGGVKAIKSI SGPFPDVTFC PTGGIGPNNY NDYLALKNVK CVGGSWLAPD DAIESGDWAR ITQLAKEAVA GAKQ
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