Gene MADE_01248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01248 
Symbol 
ID6777952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1340468 
End bp1341112 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content48% 
IMG OID642754685 
Productketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 
Protein accessionYP_002125556 
Protein GI196156067 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.62764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCGA AATGGAAAAC CTCTCCAGAG GAAATTTTTG CGGCCGGCCC AGTTGTACCT 
GTGTTGGTTA TCAATGACGT AGAAAAAGCG GTACCTCTGG CGAAAGCGCT AATGGAAGGT
GGTATCAAAG TGCTAGAAGT AACCTTACGT ACACCAGCGG CCATTGACGT GATTAAGCGA
ATTGCCGATG AAGTGCCTGA TTCTTTAATC GGTGCAGGTA CGGTAACTAA TGCACAACAG
CTAAAAGCTG TTGTTGAAGC CGGTGCTAAG TTTGCTATCA GCCCGGGAAT GACTGCAGAC
CTGCTTAAAG CGGGTATGGA TGCGGATATT CCTCTCATTC CGGGTATTTC TTCAACGTCT
GACCTGATGA AGGGTAAAGA TGCGGGTTAT ACTCACATGA AATTCTTCCC TGCAGAAGCA
TCAGGTGGCG TAAAGGCGAT TAAGTCTATC AGTGGCCCTT TCCCTGATGT GACATTCTGC
CCAACAGGCG GTATTGGTCC GAACAACTAC AACGATTACC TAGCGCTTAA AAACGTGAAG
TGCGTAGGTG GTTCGTGGTT AGCACCTGAT GATGCAATCG AGTCAGGTGA CTGGGCGCGT
ATCACTCAAC TGGCTAAAGA AGCCGTTGCT GGTGCTAAGC AATAA
 
Protein sequence
MTSKWKTSPE EIFAAGPVVP VLVINDVEKA VPLAKALMEG GIKVLEVTLR TPAAIDVIKR 
IADEVPDSLI GAGTVTNAQQ LKAVVEAGAK FAISPGMTAD LLKAGMDADI PLIPGISSTS
DLMKGKDAGY THMKFFPAEA SGGVKAIKSI SGPFPDVTFC PTGGIGPNNY NDYLALKNVK
CVGGSWLAPD DAIESGDWAR ITQLAKEAVA GAKQ