| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_01194 |
|---|
| Symbol | |
|---|
| ID | 6778029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1275168 |
|---|
| End bp | 1276382 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642754631 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| Protein accession | YP_002125502 |
|---|
| Protein GI | 196156013 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.157205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGAG CAGTTATCAC CGGTCTTGGT ATCGTATCAA GCATCGGCGT AAATAAAGAA
GACGTACTTG CTTCACTTAA AGCGGGTAAG TCTGGAATTA CATTTTCAGA ACAGTTCGCC
GAAATGGGCC TTCGCAGCCA AGTTTGGGGC GACATCGAAA TCGATTTAAA AGAGCACATC
GACCGTAAAG CAATGCGTTT TATGGGCGAT GCAGCAGGCT ATGCATACGT GGCAATGCAG
CAAGCCATTG CAGACTCTGG ACTAGAAGAA AGCGATATTT CAAACGAGCG TACAGGTATT
ATTGCTGGCT CAGGTGGCGC GTCTTCTGAA AACCAAGTGC TTTCTGCGGA TATTCTTCGC
GAAAAAGGCG TTAAGCGTGT GGGCCCCTAC ATGGTGCCTC GCTGTATGGC TTCGACGGTA
TCAGCTTGCT TAGCGACACC GTTTAAAATT CGCGGCGTGA ACTATTCAAT TGCCTCTGCG
TGTGCCACCA GTGCCCACTG TATAGGTAAC GCACTAGAGC TTATTCAACT TGGTAAGCAA
GACGTAGTAT TCGCCGGTGG CGGTGAAGAG CTACATTGGT CACTATCAAG CCAATTCGAC
GCGATGGGCG CGCTAAGCTC GAAATATAAT GACAACCCAG CGGTTGCATC ACGTACTTAT
GACGCAGCAC GCGATGGCTT TGTAAGCTCT GGCGGCGGCG GTATGGTCGT TGTTGAAGAA
CTTGAGCACG CACTAGCACG CGGTGCAAAA ATCTACGGTG AAGTAGTAGG TTACGGTGCT
ACATCAGATG GCTTCGACAT GGTTGCACCA TCGGGTGAAG GCGCAATTCG CTGTATGAAG
ATGGCGATGC AAAATATCGA TGCTCCAATC GATTACTTGA ACACCCACGG CACGTCTACG
CCTGTAGGCG ATGTGAAAGA ACTTGCGGCG ATTCAAGAAG TGTTTGGCCA AGCGGGCGTA
CCTATTAGTG CAACCAAATC ATTAACGGGC CACGCACTGG GCGCAGCGGG TGTAAACGAA
GCTATTTATA GCTTGTTAAT GATGGAAAAT AACTTTATCG CGCCATCAAT TAACATAGAC
ACGCTGGACG ACGCGGCACA AGGCTTAGAT ATTGTTACCC AAGCACGTGA AGCAACGCTG
AACACAGTGA TGTCAAATAG CTTTGGCTTC GGCGGCACTA ACGCAACGCT GGTTATGCAG
CGTTATAATG GTTAA
|
|---|
| Protein sequence | MRRAVITGLG IVSSIGVNKE DVLASLKAGK SGITFSEQFA EMGLRSQVWG DIEIDLKEHI
DRKAMRFMGD AAGYAYVAMQ QAIADSGLEE SDISNERTGI IAGSGGASSE NQVLSADILR
EKGVKRVGPY MVPRCMASTV SACLATPFKI RGVNYSIASA CATSAHCIGN ALELIQLGKQ
DVVFAGGGEE LHWSLSSQFD AMGALSSKYN DNPAVASRTY DAARDGFVSS GGGGMVVVEE
LEHALARGAK IYGEVVGYGA TSDGFDMVAP SGEGAIRCMK MAMQNIDAPI DYLNTHGTST
PVGDVKELAA IQEVFGQAGV PISATKSLTG HALGAAGVNE AIYSLLMMEN NFIAPSINID
TLDDAAQGLD IVTQAREATL NTVMSNSFGF GGTNATLVMQ RYNG
|
|---|
| |