Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01176 |
Symbol | |
ID | 6778303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 1256603 |
End bp | 1257910 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642754613 |
Product | hypothetical Short chain fatty acid transporter |
Protein accession | YP_002125484 |
Protein GI | 196155995 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2031] Short chain fatty acids transporter |
TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.680659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAATC GTGCATCAAA ACCCTTCGTA AAACTCGTCG AAAAATATCT GCCCGACCCC TATATTTTCG TTTTATTGTT AACGCTCATA ACGCTTGTCT TTGCGGTGGT CATTCAAGAC CAATCTCCAC TTACCACAGT TCAACAGTGG GGAGATGGAT TCTGGGGGCT GCTAACCTTT TCAATGCAAA TGCTCTTAGT GTTAGTAACC GGGTTTATGC TGGCATGCAC GCCGCTAGTC AAGACACTGC TGGAAAACCT CGCCCGTTTA GCTAAAGGCC CAGGAAGCGC TATTGTACTG GTTACTTTAG TGTCGCTTAC AGCCAGTTGG ATAAACTGGG GCTTCGGGCT AGTGGTAGGC GCGTTGTTCG CCAAAGCACT TGCAAGAAAA GTGTCGGTAG ATTATCGACT ATTGGTGGCG AGCGCATATT CAGGTTTTAT CGTATGGCAT GGCGGCTTGG CGGGCTCTGT ACCGTTAACT ATTGCAACAC CGGGCCATTT TTCAGAGGCA CAAATAGGCG TAATTGGTAC CAGCGAGACT ATTTTTAGTG GCTTCAACTT ACTGTTGTTG GCAATTATGT TTGTAGTTAT TCCCCTTGTG AATCGTTTAA TGCTACCTCC TAAATCTGAA AGCGTGATTG TGGATAGTGC AAAGCTACAA GACGATGCCT TAACTTCGGC GACAAACGAA AGACCCGCTG ATAGACTCGA AAACAGCAAA GCTCTTGGTT TACTTGTCGG TTTCGCTGGG CTTGCTTATC TTACGAACTA TTTTATTTCT GGCGGCGGGT TAAACCTAAA CATCGTTAAT ACGCTATTTC TTTTTCTTGC TATTGTCCTT CATGGTACGC CACGTAATGT ATTACATAGC TTGCAGCAAG CCGTTCAGGG CGGCAGCGGG ATTGTAATAC AGTTTCCGTT TTACGCGGGG ATCATGGCGG TTATGGTGCA ATCTGGATTA GCGCAGACCA TGTCAGAATG GCTAATTAGT TTTGCATCTG CAGAGTCGTT GCCCGTGTGG AGTTTTATAA GTGCAGGCAT TGTAAATATT TTCGTACCCT CGGGAGGAGG ACAGTGGGCG GTGCAAGCCC CTGTAATCCT ACCCGCTGCT GCTGAACTGG GTGCGCAAGT TAATAGGGTA GCAATGGCGG TGGCATGGGG CGATGCCTGG ACGAACTTAA TTCAGCCGTT TTGGGCATTA CCCGTACTTG CCATAGCGGG CTTAAAAGCC AAAGATATAA TGGGTTTTTG CTTAGTTCAG CTTATCGTAA CTGGCGTTAT TATTTCCTTG GTTTTACGAT TTGTGTGA
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Protein sequence | MLNRASKPFV KLVEKYLPDP YIFVLLLTLI TLVFAVVIQD QSPLTTVQQW GDGFWGLLTF SMQMLLVLVT GFMLACTPLV KTLLENLARL AKGPGSAIVL VTLVSLTASW INWGFGLVVG ALFAKALARK VSVDYRLLVA SAYSGFIVWH GGLAGSVPLT IATPGHFSEA QIGVIGTSET IFSGFNLLLL AIMFVVIPLV NRLMLPPKSE SVIVDSAKLQ DDALTSATNE RPADRLENSK ALGLLVGFAG LAYLTNYFIS GGGLNLNIVN TLFLFLAIVL HGTPRNVLHS LQQAVQGGSG IVIQFPFYAG IMAVMVQSGL AQTMSEWLIS FASAESLPVW SFISAGIVNI FVPSGGGQWA VQAPVILPAA AELGAQVNRV AMAVAWGDAW TNLIQPFWAL PVLAIAGLKA KDIMGFCLVQ LIVTGVIISL VLRFV
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