Gene MADE_01084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01084 
Symbolfur 
ID6778644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1149142 
End bp1149570 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content40% 
IMG OID642754516 
Productferric uptake regulator 
Protein accessionYP_002125392 
Protein GI196155903 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00618384 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAAA ATAAAGAATT GAAAAAAGCA GGGCTTAAAG TCACTCTGCC TCGCCTTAAA 
ATTTTACAAA TTCTGCAAGA GCCAGAAAAC CAACACATCA GTGCTGAGGA CGTATACAAA
ATTCTTATCG AACATGGCGA AGAGATTGGA CTAGCAACCG TTTATCGTGT TTTAAACCAG
TTCGATGACG CAGGTATTCT TAACCGCCAT CACTTCGAAG GTGGGAAGTC TGTATTTGAA
ATTAGTCACA AAGATCACCA CGACCATTTA GTATGCCTTA AGTGCGGTAA AGTAATTGAG
TTCGAAGATG AAATTATCGA AGAACGCCAA GAGATGATTG CTAAAAAGCA CAAGATGAAA
CTTACCCATC ACAGCCTTTA TCTATATGGT GAATGTACAG ACGGCAACTG TGACAACATG
CCTGAGTAG
 
Protein sequence
MDQNKELKKA GLKVTLPRLK ILQILQEPEN QHISAEDVYK ILIEHGEEIG LATVYRVLNQ 
FDDAGILNRH HFEGGKSVFE ISHKDHHDHL VCLKCGKVIE FEDEIIEERQ EMIAKKHKMK
LTHHSLYLYG ECTDGNCDNM PE