Gene MADE_01040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01040 
Symbol 
ID6775794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1102013 
End bp1103188 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content48% 
IMG OID642754472 
ProductSaccharopine dehydrogenase 
Protein accessionYP_002125348 
Protein GI196155859 
COG category[S] Function unknown 
COG ID[COG3268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACG AACGCGAATT TGATGTAGTT ATTTTTGGTG CTACAGGTTT TACAGGCCAG 
TTAGTGGCGG AGTACTTTCA AGCTCAGTAT GGTAGCGACA GCAGTGTGAA ATGGGCAGTG
GCAGGTCGTA ACGAAGCCAA GCTTAACAAA CTAAAACAAG AATTAGGCAT TAGCGATAGC
GTTGCTAGCA TTGTAGCAGA CGGCGACGAC GCTGAAGCAC TTGATGCCAT GACCAAGCGC
ACAGCGGTGG TACTTACCAC TGTAGGCCCG TATCAAATTT ATGGCGAAAA ATTGCTTTCT
GCGTGTGTAG ACAATGGCAC AGGCTATACA GACTTATGCG GTGAGCCAGC GTGGATGCAC
CAAATGATCA AGAAGTACGA AGCGAAGGCC AAAGAAACTG GCGCAAACAT TGTATTTTCT
TGCGGCTTCG ACTCAGTACC GTTTGACTTA GGTGTTCACT ACTTACAAGC GCATGCTAAA
AAGCAAACTG GCGACGTGAT TGAATACGTT AAAGGTCGCG TTCGCAAGAT GCAGGGAACC
TTCTCTGGTG GCACGGCTGC CAGCTTAAAA GCGACCATGG CGGCAGCGCA CAAAGATAAG
TCGGTAATGG CGGCGCTTGT TAACCCGCAT TCGTTAACCG ACGGCGCTTC AAATCAGCCA
CAGCCAGACG GCAACAAGCC TTATTTCGAT GAACAATTAG GTACATGGGT TGCGCCATTT
ATTATGGCGG CTATCAATAC TAAGAACGTT CACCGCTCTA ACTACCTAGC AGAATACGCT
TACGGTAAAA ACTTCCAGTA CGATGAAATG ATGATGACGG GGCCTGGCGA GAAAGGCGAA
GCCATGGCGA ATCACGTAGC AAAAGATAAG TCGCTTGCCA GCGATGATGG CCCTAAACCT
GGTGAAGGTC CAAGCAAAGA AGAGCGTGAA AACGGATTTT ACGATGTAAT GTTTGTGGGC
ACAGCCACCA ATGGCGATAT GCTTGCGATA TCGGTAAAAG GCGACAAAGA CCCAGGCTAT
GGCTCTACCA GCAAGATGAT TTCAGAATCG GCCCTTTGCT TGTGTAAAGA CGTTAACCTG
CAAGGCGGCT TTTTTACACC AGCGGCAGCC TTTGGCGATA AGCTAATTAG CCGCTTGGAG
GAAAAAGCGG GCTTAACCTT TGCTATCGAG AAATGA
 
Protein sequence
MSNEREFDVV IFGATGFTGQ LVAEYFQAQY GSDSSVKWAV AGRNEAKLNK LKQELGISDS 
VASIVADGDD AEALDAMTKR TAVVLTTVGP YQIYGEKLLS ACVDNGTGYT DLCGEPAWMH
QMIKKYEAKA KETGANIVFS CGFDSVPFDL GVHYLQAHAK KQTGDVIEYV KGRVRKMQGT
FSGGTAASLK ATMAAAHKDK SVMAALVNPH SLTDGASNQP QPDGNKPYFD EQLGTWVAPF
IMAAINTKNV HRSNYLAEYA YGKNFQYDEM MMTGPGEKGE AMANHVAKDK SLASDDGPKP
GEGPSKEERE NGFYDVMFVG TATNGDMLAI SVKGDKDPGY GSTSKMISES ALCLCKDVNL
QGGFFTPAAA FGDKLISRLE EKAGLTFAIE K