Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01040 |
Symbol | |
ID | 6775794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1102013 |
End bp | 1103188 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642754472 |
Product | Saccharopine dehydrogenase |
Protein accession | YP_002125348 |
Protein GI | 196155859 |
COG category | [S] Function unknown |
COG ID | [COG3268] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACG AACGCGAATT TGATGTAGTT ATTTTTGGTG CTACAGGTTT TACAGGCCAG TTAGTGGCGG AGTACTTTCA AGCTCAGTAT GGTAGCGACA GCAGTGTGAA ATGGGCAGTG GCAGGTCGTA ACGAAGCCAA GCTTAACAAA CTAAAACAAG AATTAGGCAT TAGCGATAGC GTTGCTAGCA TTGTAGCAGA CGGCGACGAC GCTGAAGCAC TTGATGCCAT GACCAAGCGC ACAGCGGTGG TACTTACCAC TGTAGGCCCG TATCAAATTT ATGGCGAAAA ATTGCTTTCT GCGTGTGTAG ACAATGGCAC AGGCTATACA GACTTATGCG GTGAGCCAGC GTGGATGCAC CAAATGATCA AGAAGTACGA AGCGAAGGCC AAAGAAACTG GCGCAAACAT TGTATTTTCT TGCGGCTTCG ACTCAGTACC GTTTGACTTA GGTGTTCACT ACTTACAAGC GCATGCTAAA AAGCAAACTG GCGACGTGAT TGAATACGTT AAAGGTCGCG TTCGCAAGAT GCAGGGAACC TTCTCTGGTG GCACGGCTGC CAGCTTAAAA GCGACCATGG CGGCAGCGCA CAAAGATAAG TCGGTAATGG CGGCGCTTGT TAACCCGCAT TCGTTAACCG ACGGCGCTTC AAATCAGCCA CAGCCAGACG GCAACAAGCC TTATTTCGAT GAACAATTAG GTACATGGGT TGCGCCATTT ATTATGGCGG CTATCAATAC TAAGAACGTT CACCGCTCTA ACTACCTAGC AGAATACGCT TACGGTAAAA ACTTCCAGTA CGATGAAATG ATGATGACGG GGCCTGGCGA GAAAGGCGAA GCCATGGCGA ATCACGTAGC AAAAGATAAG TCGCTTGCCA GCGATGATGG CCCTAAACCT GGTGAAGGTC CAAGCAAAGA AGAGCGTGAA AACGGATTTT ACGATGTAAT GTTTGTGGGC ACAGCCACCA ATGGCGATAT GCTTGCGATA TCGGTAAAAG GCGACAAAGA CCCAGGCTAT GGCTCTACCA GCAAGATGAT TTCAGAATCG GCCCTTTGCT TGTGTAAAGA CGTTAACCTG CAAGGCGGCT TTTTTACACC AGCGGCAGCC TTTGGCGATA AGCTAATTAG CCGCTTGGAG GAAAAAGCGG GCTTAACCTT TGCTATCGAG AAATGA
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Protein sequence | MSNEREFDVV IFGATGFTGQ LVAEYFQAQY GSDSSVKWAV AGRNEAKLNK LKQELGISDS VASIVADGDD AEALDAMTKR TAVVLTTVGP YQIYGEKLLS ACVDNGTGYT DLCGEPAWMH QMIKKYEAKA KETGANIVFS CGFDSVPFDL GVHYLQAHAK KQTGDVIEYV KGRVRKMQGT FSGGTAASLK ATMAAAHKDK SVMAALVNPH SLTDGASNQP QPDGNKPYFD EQLGTWVAPF IMAAINTKNV HRSNYLAEYA YGKNFQYDEM MMTGPGEKGE AMANHVAKDK SLASDDGPKP GEGPSKEERE NGFYDVMFVG TATNGDMLAI SVKGDKDPGY GSTSKMISES ALCLCKDVNL QGGFFTPAAA FGDKLISRLE EKAGLTFAIE K
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