Gene MADE_01009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_01009 
Symbol 
ID6776351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1060158 
End bp1062323 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content47% 
IMG OID642754441 
Producthypothetical protein 
Protein accessionYP_002125317 
Protein GI196155828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00499323 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAG TAAGTGTATT TTGTATTTCT GCCGCGTTGC TCGGCACGGC AATGCAGGTA 
GATGCTAAGG AAGGCATGTT CACGCCAGAG CAACTCCCTT CAATTGCTGG CGATTTAAAA
GAAACCGGTT TGGAAATTCC TGCAAGTAGT ATTAACAACT TAACCGCGTT TCCAATGGGC
GCTATTGTGT CGCTTGGTGG TTGTTCAGCA TCGTTTGTGT CTGACAAAGG CTTAGCGGTA
ACCAATCACC ACTGTGCCCG CGGTTCAGTG CAGTACAACA GCACACCAGA AAACAACTAC
TTAAAAGATG GCTTCTTAGC AAAAGAAATT GGCGACGAAC TGCCAGCAGC ACCAGGCACT
CGCATGTTTG TTACGGTGGA TTTTTCTGAC GTAACCGACA AAGTTGTTGG CGGTATCAAT
GATGACGTTC AAGGGCGCGA GCGCTACGAC CTTATCGAAG CAAACCGTAA AGCGCTAATT
GCAGAATGTG AGTCAGAAGC AGGCTTTCGC TGCTCTGTTC CGTCATTCTT CCAAGGCCTT
GAATACAAGC TTATTAAGCA AATGGAAATC CGTGACGTGC GTATTGCTTA TGCGCCCGCT
GATTCTATCG GTAAATACGG CGGCGATGTA GATAACTGGA TGTGGCCTCG CCACACCGGT
GATTTCTCTT TCTATCGCGC TTACGTAGGT AAAGACGGTA AACCCGCTGA TTACAGTGAA
GACAACGTGC CGTTTGAACC TGATCACTTC CTTAAAGTTT CGGCAGCGGG CCTTGAAGAC
GGCGACTTTG TAATGGCGGC GGGTTACCCT GGCTCAACGA ATCGCTATGC GCGTTTGTCG
CAAGTTTCGT ACATGTTTGA CTGGTTATAC CCTACCTACC TTGAACTGGT AGACGAATGG
ATTAAAACCA TTGAAACCTC GTCAGAAGAA GGTAGCGATG CTCGTATTAA ATATGAAGCA
ACACTTGCAG GCTTGAATAA CTTTCATAAA AACACGTTAG GTCAGCTTTC TGGCGCTAAG
CGTGTTGGGC TTGTTCCTCG CCGCGCCGAG CGTGAAGAGC AACTGGCAGC ATGGCTTGAT
AAAAATGGTA AGAGTGAACT AAAACAAGCC CTGGCCGATC TTGATGCGGT TAGCGCAGAA
CAAATGCAGA TGAACAAGCA AAACTTCTGG TACAACAACC TAGGTCGTGC ACAACTGTTG
TCATCCGCGC AAACCTTATA TCGCAACGCA ATTGAAAGGG AAAAGCCAGA TGCAGAGCGT
GAACGTGGGT ATCAAGAGCG CGATCAAATT CGTCTTAAAG AAAGCGCAGA GCGCATAGAG
CGCCGCTTCG ACGCTGTGGT AGATCAAGCT GTGTGGCAAA AAATGATCAG CATGTACCTA
GAGCAGCCTG AAGAAAACCG TGTTGCGGCT TTCGATAAAG CAGTAGGCAT TGACGGTAGT
ACTGACAGCA AAACGCTTCA TAATAAGTTA AAAGCGTTTT ATGACAACAC GTCACTGAAC
AATACTGAAG AGCGTTTGAA GTGGTTAACC GCAAGCCGCG AAGCGTTTGA GAAGAGCAAC
GACCCATTCA TCAAACTAGC AGTTGCATTA TTCGATACTG AAATGGCTAT TGAAGATAAA
AGTAAAACGC TTAGCGGTAA AGCTGCTGCA CTTCGCCCTA AATACATGAG CGCGATTATC
GAATGGCAAA AATCTTTGGG CAGCCTCGCT TACCCAGATG CAAACAGCAC GCTTCGAGTA
ACTTACGGTA ACGTGATGGG CGGTTCGCCA AAAGATGGCC TCATTTACGA ACCCTTTACC
CGTCTTGAAG GCATTACTGA AAAAGATACC GGCGAAACAC CGTTTGATTC ACCGAAAAAG
CAGCTTGAGC TTATTAAAGA CAAGCAGTAC GGTCCGTACA AACTTGAAGA CATCAATAGC
GTACCGGTAA ACTTCCTAAC GGACTTAGAT TCTACAGGCG GTAACTCAGG CTCTGCAACG
CTTAATGCAA AAGCAGAACT AATCGGTTTG TTGTTTGACG GTACGTTTGA AAGCGTTAAC
TCAGATTGGG ACTTTGATCC GAAAACAACC CGCACCATTC ATGTAGACAC GCGCTACATG
CTATGGGTAA TGGAGTACGT TGACGGTGCA ACAAACCTGA TCGAAGAAAT GACCATCGTA
AAATAA
 
Protein sequence
MSKVSVFCIS AALLGTAMQV DAKEGMFTPE QLPSIAGDLK ETGLEIPASS INNLTAFPMG 
AIVSLGGCSA SFVSDKGLAV TNHHCARGSV QYNSTPENNY LKDGFLAKEI GDELPAAPGT
RMFVTVDFSD VTDKVVGGIN DDVQGRERYD LIEANRKALI AECESEAGFR CSVPSFFQGL
EYKLIKQMEI RDVRIAYAPA DSIGKYGGDV DNWMWPRHTG DFSFYRAYVG KDGKPADYSE
DNVPFEPDHF LKVSAAGLED GDFVMAAGYP GSTNRYARLS QVSYMFDWLY PTYLELVDEW
IKTIETSSEE GSDARIKYEA TLAGLNNFHK NTLGQLSGAK RVGLVPRRAE REEQLAAWLD
KNGKSELKQA LADLDAVSAE QMQMNKQNFW YNNLGRAQLL SSAQTLYRNA IEREKPDAER
ERGYQERDQI RLKESAERIE RRFDAVVDQA VWQKMISMYL EQPEENRVAA FDKAVGIDGS
TDSKTLHNKL KAFYDNTSLN NTEERLKWLT ASREAFEKSN DPFIKLAVAL FDTEMAIEDK
SKTLSGKAAA LRPKYMSAII EWQKSLGSLA YPDANSTLRV TYGNVMGGSP KDGLIYEPFT
RLEGITEKDT GETPFDSPKK QLELIKDKQY GPYKLEDINS VPVNFLTDLD STGGNSGSAT
LNAKAELIGL LFDGTFESVN SDWDFDPKTT RTIHVDTRYM LWVMEYVDGA TNLIEEMTIV
K