Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01009 |
Symbol | |
ID | 6776351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 1060158 |
End bp | 1062323 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642754441 |
Product | hypothetical protein |
Protein accession | YP_002125317 |
Protein GI | 196155828 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00499323 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAG TAAGTGTATT TTGTATTTCT GCCGCGTTGC TCGGCACGGC AATGCAGGTA GATGCTAAGG AAGGCATGTT CACGCCAGAG CAACTCCCTT CAATTGCTGG CGATTTAAAA GAAACCGGTT TGGAAATTCC TGCAAGTAGT ATTAACAACT TAACCGCGTT TCCAATGGGC GCTATTGTGT CGCTTGGTGG TTGTTCAGCA TCGTTTGTGT CTGACAAAGG CTTAGCGGTA ACCAATCACC ACTGTGCCCG CGGTTCAGTG CAGTACAACA GCACACCAGA AAACAACTAC TTAAAAGATG GCTTCTTAGC AAAAGAAATT GGCGACGAAC TGCCAGCAGC ACCAGGCACT CGCATGTTTG TTACGGTGGA TTTTTCTGAC GTAACCGACA AAGTTGTTGG CGGTATCAAT GATGACGTTC AAGGGCGCGA GCGCTACGAC CTTATCGAAG CAAACCGTAA AGCGCTAATT GCAGAATGTG AGTCAGAAGC AGGCTTTCGC TGCTCTGTTC CGTCATTCTT CCAAGGCCTT GAATACAAGC TTATTAAGCA AATGGAAATC CGTGACGTGC GTATTGCTTA TGCGCCCGCT GATTCTATCG GTAAATACGG CGGCGATGTA GATAACTGGA TGTGGCCTCG CCACACCGGT GATTTCTCTT TCTATCGCGC TTACGTAGGT AAAGACGGTA AACCCGCTGA TTACAGTGAA GACAACGTGC CGTTTGAACC TGATCACTTC CTTAAAGTTT CGGCAGCGGG CCTTGAAGAC GGCGACTTTG TAATGGCGGC GGGTTACCCT GGCTCAACGA ATCGCTATGC GCGTTTGTCG CAAGTTTCGT ACATGTTTGA CTGGTTATAC CCTACCTACC TTGAACTGGT AGACGAATGG ATTAAAACCA TTGAAACCTC GTCAGAAGAA GGTAGCGATG CTCGTATTAA ATATGAAGCA ACACTTGCAG GCTTGAATAA CTTTCATAAA AACACGTTAG GTCAGCTTTC TGGCGCTAAG CGTGTTGGGC TTGTTCCTCG CCGCGCCGAG CGTGAAGAGC AACTGGCAGC ATGGCTTGAT AAAAATGGTA AGAGTGAACT AAAACAAGCC CTGGCCGATC TTGATGCGGT TAGCGCAGAA CAAATGCAGA TGAACAAGCA AAACTTCTGG TACAACAACC TAGGTCGTGC ACAACTGTTG TCATCCGCGC AAACCTTATA TCGCAACGCA ATTGAAAGGG AAAAGCCAGA TGCAGAGCGT GAACGTGGGT ATCAAGAGCG CGATCAAATT CGTCTTAAAG AAAGCGCAGA GCGCATAGAG CGCCGCTTCG ACGCTGTGGT AGATCAAGCT GTGTGGCAAA AAATGATCAG CATGTACCTA GAGCAGCCTG AAGAAAACCG TGTTGCGGCT TTCGATAAAG CAGTAGGCAT TGACGGTAGT ACTGACAGCA AAACGCTTCA TAATAAGTTA AAAGCGTTTT ATGACAACAC GTCACTGAAC AATACTGAAG AGCGTTTGAA GTGGTTAACC GCAAGCCGCG AAGCGTTTGA GAAGAGCAAC GACCCATTCA TCAAACTAGC AGTTGCATTA TTCGATACTG AAATGGCTAT TGAAGATAAA AGTAAAACGC TTAGCGGTAA AGCTGCTGCA CTTCGCCCTA AATACATGAG CGCGATTATC GAATGGCAAA AATCTTTGGG CAGCCTCGCT TACCCAGATG CAAACAGCAC GCTTCGAGTA ACTTACGGTA ACGTGATGGG CGGTTCGCCA AAAGATGGCC TCATTTACGA ACCCTTTACC CGTCTTGAAG GCATTACTGA AAAAGATACC GGCGAAACAC CGTTTGATTC ACCGAAAAAG CAGCTTGAGC TTATTAAAGA CAAGCAGTAC GGTCCGTACA AACTTGAAGA CATCAATAGC GTACCGGTAA ACTTCCTAAC GGACTTAGAT TCTACAGGCG GTAACTCAGG CTCTGCAACG CTTAATGCAA AAGCAGAACT AATCGGTTTG TTGTTTGACG GTACGTTTGA AAGCGTTAAC TCAGATTGGG ACTTTGATCC GAAAACAACC CGCACCATTC ATGTAGACAC GCGCTACATG CTATGGGTAA TGGAGTACGT TGACGGTGCA ACAAACCTGA TCGAAGAAAT GACCATCGTA AAATAA
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Protein sequence | MSKVSVFCIS AALLGTAMQV DAKEGMFTPE QLPSIAGDLK ETGLEIPASS INNLTAFPMG AIVSLGGCSA SFVSDKGLAV TNHHCARGSV QYNSTPENNY LKDGFLAKEI GDELPAAPGT RMFVTVDFSD VTDKVVGGIN DDVQGRERYD LIEANRKALI AECESEAGFR CSVPSFFQGL EYKLIKQMEI RDVRIAYAPA DSIGKYGGDV DNWMWPRHTG DFSFYRAYVG KDGKPADYSE DNVPFEPDHF LKVSAAGLED GDFVMAAGYP GSTNRYARLS QVSYMFDWLY PTYLELVDEW IKTIETSSEE GSDARIKYEA TLAGLNNFHK NTLGQLSGAK RVGLVPRRAE REEQLAAWLD KNGKSELKQA LADLDAVSAE QMQMNKQNFW YNNLGRAQLL SSAQTLYRNA IEREKPDAER ERGYQERDQI RLKESAERIE RRFDAVVDQA VWQKMISMYL EQPEENRVAA FDKAVGIDGS TDSKTLHNKL KAFYDNTSLN NTEERLKWLT ASREAFEKSN DPFIKLAVAL FDTEMAIEDK SKTLSGKAAA LRPKYMSAII EWQKSLGSLA YPDANSTLRV TYGNVMGGSP KDGLIYEPFT RLEGITEKDT GETPFDSPKK QLELIKDKQY GPYKLEDINS VPVNFLTDLD STGGNSGSAT LNAKAELIGL LFDGTFESVN SDWDFDPKTT RTIHVDTRYM LWVMEYVDGA TNLIEEMTIV K
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