Gene MADE_00989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00989 
Symbol 
ID6776627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp1035328 
End bp1035873 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content43% 
IMG OID642754421 
ProductdTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase 
Protein accessionYP_002125297 
Protein GI196155808 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTAA TTAAGACAGA CATCCCTGAC GTAAAAATCA TTGAGCCTAA AGTATTTGGA 
GACGAGCGTG GTTTTTTCCT AGAAACCTTT CGCACCGATT GGTTTAAGAA AGAATGCGCA 
GATGTAGATT TTGTTCAAGA TAACCACTCT AAATCTAGCC AAGGTATTCT TCGCGGCCTT 
CATTATCAAA TAGAGCAAAC CCAAGGCAAA TTGGTGCGTG TAGTTAGCGG CGAAGTGTAC 
GATGTAGCCG TAGATATGCG TAAAGACTCA CCTACTTACG GTAAGTGGGT TGGGGTGACG 
TTATCAGCTG AGAATAAACG TCAGTTATGG GTACCTGCGG GCTTTGCTCA CGGTTTCTAC 
GTAACAAGCG AAAATGCTGA GTTCGTGTAT AAGTGTACAG ACTATTACCA CCCGGAATCT 
GAAATATCAG TTAAGTACAA CGACTCAACG TTAAATATCG ACTGGCCTTT AGTGAATGGC 
GAAAAACCTT CACTTTCAGG GAAAGACGAA GCTGGGTTGG CATTTGTTGA CGCACCTACG 
TTTTAA
 
Protein sequence
MQVIKTDIPD VKIIEPKVFG DERGFFLETF RTDWFKKECA DVDFVQDNHS KSSQGILRGL 
HYQIEQTQGK LVRVVSGEVY DVAVDMRKDS PTYGKWVGVT LSAENKRQLW VPAGFAHGFY 
VTSENAEFVY KCTDYYHPES EISVKYNDST LNIDWPLVNG EKPSLSGKDE AGLAFVDAPT 
F