| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00988 |
|---|
| Symbol | |
|---|
| ID | 6775167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 1034371 |
|---|
| End bp | 1035252 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642754420 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_002125296 |
|---|
| Protein GI | 196155807 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAGG GAATAATATT AGCTGGCGGA TCTGGCACAC GTTTGCACCC GTTAACTAAG
GTGGTTAGTA AGCAGCTAAT GCCTGTTTAC GACAAGCCGA TGATTTTTTA TCCGTTAACC
ACGTTAATGA TGTCGGGCAT TCGCGATGTA CTCATTATCA CCACGCCCGA AGAGCAGCAA
AGGTTTATCG ACCTTATCGG TGATGGCTCG GCGTTAGGAA TGAATATTCA ATACGCGGTA
CAGCCCTCGG CAGATGGCTT GGCACAGGCG TTTCTTATAG GCGAAGAGTT TATTGGAAAC
GATAGCTGTT CGCTGGTTCT TGGCGACAAC ATTTATTACG GCCACGACTT AAAGTTGTCT
TTGCAGAATG CGTTTAAACA AGAGCACGGT GCAACGGTGT TTGGATATCA CGTTAACGAC
CCAGAACGTT ATGGTGTAGT TGATTTCGAC GATGACTGGA ATGCACTTTC CATCGAGGAA
AAGCCCGCTG TTCCTAAATC AAACTATGCG GTAACGGGTC TTTACTACTA TGACAACCGC
GTAGTGGACT TCGCCAAAGA AGTTAAGCCC TCTCATAGAG GTGAACTTGA AATTACTGAC
TTGAACAACT TATATCTTCA AGATGGCAGC CTCAAAGTAG AGCTAATGGG GCGCGGTTCA
GCATGGTTGG ATACAGGTAC GCTTGATTCT CTACTCGATG CTGCAAACTT TGTGGCGGCT
ATCGAAAAAC GCCAAGGCTT GAAAGTATGT TGCCCAGAAG AAGTGGCCTA TAGAATGGGC
TATATCAATG CTGAGCAACT TGAAAAGCTA GCGGCACCAC TCAAGAAAAG TGGTTATGGC
GATTACCTGC TAAAAGTCAT TAACGATAGA GTTAAAATCT AG
|
|---|
| Protein sequence | MRKGIILAGG SGTRLHPLTK VVSKQLMPVY DKPMIFYPLT TLMMSGIRDV LIITTPEEQQ
RFIDLIGDGS ALGMNIQYAV QPSADGLAQA FLIGEEFIGN DSCSLVLGDN IYYGHDLKLS
LQNAFKQEHG ATVFGYHVND PERYGVVDFD DDWNALSIEE KPAVPKSNYA VTGLYYYDNR
VVDFAKEVKP SHRGELEITD LNNLYLQDGS LKVELMGRGS AWLDTGTLDS LLDAANFVAA
IEKRQGLKVC CPEEVAYRMG YINAEQLEKL AAPLKKSGYG DYLLKVINDR VKI
|
|---|
| |