Gene MADE_00956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00956 
SymbolrpmD 
ID6776429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp1000458 
End bp1000637 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content44% 
IMG OID642754388 
Product50S ribosomal protein L30 
Protein accessionYP_002125264 
Protein GI196155775 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0648954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGA TTAAAGTAAA GCAAACTAAA AGTGCAATTG GCCGTCTGCC AAAGCACAAA 
GCTACGCTTA AAGGTTTAGG CCTTCGTAAA ATCAACCATG TTCGTGAACT GGAAGATACC
CCAGCCGTTC GTGGCATGAT CAACCGTGTA CATTACATGG TTGAGATAGT GGAGGAGTAA
 
Protein sequence
MATIKVKQTK SAIGRLPKHK ATLKGLGLRK INHVRELEDT PAVRGMINRV HYMVEIVEE