Gene MADE_00897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00897 
Symbol 
ID6778969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp945651 
End bp948305 
Gene Length2655 bp 
Protein Length884 aa 
Translation table11 
GC content42% 
IMG OID642754329 
ProductGAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal 
Protein accessionYP_002125205 
Protein GI196155716 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.717501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAT CTCCTCAAAA CTTTAACTTT GAACGTTGTG AAGACGAGCC GATACACATT 
CCCGAAAGTG TACAAAGTTA CGGTTTTCTA ATTGCGTTTA GCTACGACGA CCTGAATATC
TCAATTGTCA GTGAAAACTG CGAAACGATA TTTGCAGAGG GGATCGTTGG AAAAAACTTC
TTGGATATTC TTTCCTCTGA TACTAACGAG CGCGCTTTTC TTGAAGAAAC CTTCGATAGA
GTATCAAAAA GCAAAATACG CCTACCTATT AAGTTGATTC TAAATAAAGC ACTTTTAAAG
GAAGGCGAAG CCAAAGATTA TTTAGCGGTT GTTTACGATT CAGGTCATCA TTATGTGGTC
GAGCTTGAGC CTGCTACAGA ATTTAGAGAT GCCTACAGCG CAGAGCAATT CATTAAGCTT
TATTCAATGT CTATTGCGCC ACGCTTCAAA GAAATGACAT CTCTCGGTGA GATGGCGCAA
GAGATGGTGT CAACCATTAG GTATCTCACC AATATGGATA GAGTCGTACT TTATAAATTT
AATGAAGACT ACTCGGGGAA GGTTATAGCA GAAGCCAAAG CTGAAGATAT GGAGTCTTAC
AAAGATTTGT ATTTCCCCGC CTCAGATATA CCAAAGCAGG CCAGGGAGTT GTACAAAACA
AACTGGGTAA GGCTAACTCC TGATACTGAG TTGCCCCCAG CTAGGTTAGT GCCTTCTGTG
GAGGAGTCGG GACGAAAGCG GTTAGATTTG ACTCGTTCGC TTCTGCGCAC GTTCTCGCCT
ATTCACCTGC AATATATTAG AAACCAAGGT TTGCGGGCTT CATTTTCCAT TTCGTTAGTC
ACCGATGGTA AGTTATACGG GCTCATTTCC TGTCATCATC GTGAGGCCTG CTATATTCCT
CAAGATGTAA GGCTACAGTG CGAGAATTTA AGCCAATTGT TTAGCTGGCA TTTGTTGGCT
AAAGAAGAAG AAATTGCGAA ACAGAAGAAG TTTGTCACCG ATGAAGCTGT TGATGCCATG
CTAGACAAAA TTGGCCCAGC TAACCCTATT AGTCGCGTGG TTAAAAGCGG CGAACGGGCT
TTTTTAGATG CGCTCAATAG TTCAGGGTTT GTTTACTATT CACAGTACGA AACCATTACG
CTTGGCTCTA CCTTACCGAT AGACCTTATT AAAGACATCT TTTCTAAGGC CAGTAGTGAA
GGCGGTTTTC CTTACACAAA CGATTCACTT TATGATGATT ACCCGGAAGC ACGAGAGCAT
GGTATTGCGG GTATTATGAT CATTCCACTG TTTGAAAAAA AGCAGTACTT TACCGCTTGG
TTTAGAAAAG AAACCCATCG CATTCAAAAG TGGATTGGCG CTGAAGATGA AAAGTCAGAA
GAAGCACCAA AATCTGAGCG CCTTAAACCT CGTTCGTCTT TTACTATCCA TACTCGAAAA
ATTGAGGGGC GTTCAACACC TTTTGATAAA GCAGATGTTG ATACCGCCAA TCGGCTAAAT
AGAATGTTTT TGGTATATGC TCTTGATGTG CAAGAGCGTA TGCATATAAG CATCCAAGAA
CTCGAAAAAC AAGATAATTA CAGAAATGAA TTCCTTGCTA CCTTGGCTCA TGAATTACGA
AACCCATTGG GCCCAATCAT GTCGGGGGCA AGCATTTTAG AAACGGTCGA TGATGATAAA
ACGCGTAAAA GAGTAACGGC AATTATTAAT CGACAAGCGG AATACATGTC TAAACTCATC
AACGACTTAA TGGATGTATC TCGTATTACC CGCGGCAAGG TTAAGCTTGA ATTTGAAAGA
TTGAGCATTC AAGACGTCCT TTCTGACTCG CTTGAAATTG TTGAGCAGCA AGTGAAAGCC
AAGAAGCACG ATATAACCGT AAATTGTCTT GATGAAGATG TGACCGTTTA CGGAGATAAA
GCGCGCTTAA GCCAGATTTT CTCTAACATT ATTCATAACG CGACTAAGTA TACAAAAGAG
TCGGGGAAGA TTGTTGTAGA TATCAGAAAA GACGGAGTAA TGATTGTTGT TTCTGTTAAA
GATAACGGCA TGGGCATCCC TGAAGATAGG CTAAAAGATG TGTTCAACAT GTTCACCCAA
ATTGAAGCGC ATTCTACACA TACCAAAGGC GGGCTTGGTA TTGGGCTAAC ATTGGTGAGT
AAGCTGGTGG CATTACATCA TGGCGAAGTA TCTGTAATGA GCGAGGGCGT CGGTCAAGGA
AGTACTTTTG AAGTTAGGCT ACCTATCTCC AAAACAGCTT TTGAGCAGTC TGACAACAAA
GAAATGGAAT CTGTTGTACC AAATAAAAGT AAAGTGATGT TTGTGGATGA CAACGCCGAT
CTTATCGATG CTTATTGCTT GTTAGCTGAG TCGATGGGGG TTACTGCTTT GGGAATTACC
TCTCCGACAG AAGCGGTAGA GAAATTTAAA GCCTTTAAGC CAAACTGTGT ATTCCTTGAT
ATCGGCATGC CAGATATTGA TGGTTATGAG CTAGTTAAAA TGCTTAAAGC CCTACCAGAA
GCAGACAGCG TTAAGTTTTA CTCTCAAAGC GGGTGGGGGT CAGGCAAATA TATCGAGGAT
TCTAAATCTG CTGGGTTCGA CAAACACTTT GTAAAGCCGC TGTCTAAAGA AACTATCAGG
TCAGTGCTAA GTTAG
 
Protein sequence
MNQSPQNFNF ERCEDEPIHI PESVQSYGFL IAFSYDDLNI SIVSENCETI FAEGIVGKNF 
LDILSSDTNE RAFLEETFDR VSKSKIRLPI KLILNKALLK EGEAKDYLAV VYDSGHHYVV
ELEPATEFRD AYSAEQFIKL YSMSIAPRFK EMTSLGEMAQ EMVSTIRYLT NMDRVVLYKF
NEDYSGKVIA EAKAEDMESY KDLYFPASDI PKQARELYKT NWVRLTPDTE LPPARLVPSV
EESGRKRLDL TRSLLRTFSP IHLQYIRNQG LRASFSISLV TDGKLYGLIS CHHREACYIP
QDVRLQCENL SQLFSWHLLA KEEEIAKQKK FVTDEAVDAM LDKIGPANPI SRVVKSGERA
FLDALNSSGF VYYSQYETIT LGSTLPIDLI KDIFSKASSE GGFPYTNDSL YDDYPEAREH
GIAGIMIIPL FEKKQYFTAW FRKETHRIQK WIGAEDEKSE EAPKSERLKP RSSFTIHTRK
IEGRSTPFDK ADVDTANRLN RMFLVYALDV QERMHISIQE LEKQDNYRNE FLATLAHELR
NPLGPIMSGA SILETVDDDK TRKRVTAIIN RQAEYMSKLI NDLMDVSRIT RGKVKLEFER
LSIQDVLSDS LEIVEQQVKA KKHDITVNCL DEDVTVYGDK ARLSQIFSNI IHNATKYTKE
SGKIVVDIRK DGVMIVVSVK DNGMGIPEDR LKDVFNMFTQ IEAHSTHTKG GLGIGLTLVS
KLVALHHGEV SVMSEGVGQG STFEVRLPIS KTAFEQSDNK EMESVVPNKS KVMFVDDNAD
LIDAYCLLAE SMGVTALGIT SPTEAVEKFK AFKPNCVFLD IGMPDIDGYE LVKMLKALPE
ADSVKFYSQS GWGSGKYIED SKSAGFDKHF VKPLSKETIR SVLS