| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00866 |
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| Symbol | |
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| ID | 6777549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 912870 |
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| End bp | 914477 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642754298 |
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| Product | CRISPR-associated protein, Cse1 family |
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| Protein accession | YP_002125174 |
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| Protein GI | 196155685 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.046079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTAC TCAAAGAGCC TTGGCTGTTG TTTAACGTGC AACAACCAGA TGGAAGCATC
GCTGAAAAAA CGTTGCCGAT AACCGCCATT GCAAAACCAG AAGTCATCGA CTTTGCACTA
CCAAGGGCTG ATTTTCAGGG CGCAGCCTAT CAGTTTGCGA TTGGGCTATT GCAAACCTGT
TTCGCGCCTG ATGATGAGTT CGAATGGAAA GATAACTATC TTGAACCACC AACAGAAGAT
GCCCTTCGGC CAGCTTTTTC CAAAGCAGAA CATGCATTCA ATGCCACAGG TGATGGCCCG
CTTTTCATGC AAGACTTTGA TAGTTTGGAT GAGGCAAAGC CAACCTCAGT TTCGGGGTTA
CTCATCGAAG CGCCAGGTGG AAATGGCTTA AAGCTGAATA CCGATCACTT TGTTAAAAGA
GGGATTGGTG AAGTTATGTC TTTGCCTATG GCGGTTTTGG CGCTTTTTAC TCTCCAGATA
AATGCTCCTG CTGGTGGGCA GGGACATCGT ACCGGACTTC GTGGTGGTGG CCCGCTTACT
ACCTTGGTAA TGCCACAAAA TGAAAACTCC CCGCTCTGGC AAAAACTGTG GTTAAACGTT
GCGCCTAATG ATGAACGTTA CTCCGCCCCA GATTTACACA GTGACACTGT GTTCCCATGG
TTAGGTAAAA CTCGAGTCAG TGCAAAGAAG GGGAGCGAAA CTTATCAGAA AGATGTGCAC
CCGCTACATA TGTTCTGGTC GATGCCAAGA CGCATAAGAC TGATAGTCGA AGATGTTGCT
GGCGAATGCA GTCTTACCGG AAAGTCTTGT AGCCAGCTGG TGAAACTCTA TAAGACTCAG
AATTATGGTG CCAATTATGC TGGCTCGTGG TCACACCCCC TTACACCGTA TAAGCGTGAC
TTAAAAAAGC CGGACCAGGA AGATTTGTCT ATAAAAGGTC AACCTGGCGG CATTACCTAT
AAGATCTGGG ACGTACTCAC ACTGACGGGC TCACCCGATG GCGGCAAAAC CCAGCAGATG
TGTGCAAGTG TAGTTCGTTC TTTTAATCAT CTGGTCAACG ATGACATTTT AGAGGATGTA
ACGGCACAAG CCAGACTATG GGTTTTTGGC TACGACATGG ACAACATGAA AGCACGTGGT
TGGTACTCAG AAACCATGCC GCTTTTTCAG GTTCCATCGG CTAAGCAACA ACACATTCTT
GACTACATTA AACAACTTCA GACTATCGCT AATGATGCCC TTTGGCATTG TCGCAGCCAG
ATAAAATCGG CGTGGTTTGA TAAACCCGGT GATGCAAAAG GGGATTTTAG TTTTATTGAA
ACCGCCTTTT GGCAACAAAC TCAATCTGCG TTCTTCGCGG CCGTGCAGCA GTTGATGAGT
AGTGATTCCC TGTACTTAAC CTCAATGGAA GCAAAACAGT GGCTGTCCAC TCTTAGGAAT
GTTGCGTTGT CTTTATTCGA TGAATATGCG CTATCTGAAC TGGGTTCTGA ACGCACTATG
GAGAAGCGAA TTGGAGCAAG AAAAAACCTG TTAAAAGGGC TGTATTCAAA ATCATTCAAA
AAATTTGAAA CGGAGCACCA AATTGAGCCG AATAAGGAGG CCAACTAA
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| Protein sequence | MNLLKEPWLL FNVQQPDGSI AEKTLPITAI AKPEVIDFAL PRADFQGAAY QFAIGLLQTC
FAPDDEFEWK DNYLEPPTED ALRPAFSKAE HAFNATGDGP LFMQDFDSLD EAKPTSVSGL
LIEAPGGNGL KLNTDHFVKR GIGEVMSLPM AVLALFTLQI NAPAGGQGHR TGLRGGGPLT
TLVMPQNENS PLWQKLWLNV APNDERYSAP DLHSDTVFPW LGKTRVSAKK GSETYQKDVH
PLHMFWSMPR RIRLIVEDVA GECSLTGKSC SQLVKLYKTQ NYGANYAGSW SHPLTPYKRD
LKKPDQEDLS IKGQPGGITY KIWDVLTLTG SPDGGKTQQM CASVVRSFNH LVNDDILEDV
TAQARLWVFG YDMDNMKARG WYSETMPLFQ VPSAKQQHIL DYIKQLQTIA NDALWHCRSQ
IKSAWFDKPG DAKGDFSFIE TAFWQQTQSA FFAAVQQLMS SDSLYLTSME AKQWLSTLRN
VALSLFDEYA LSELGSERTM EKRIGARKNL LKGLYSKSFK KFETEHQIEP NKEAN
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