Gene MADE_00734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00734 
Symbol 
ID6777595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp773682 
End bp774353 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content49% 
IMG OID642754166 
ProductDJ-1/PfpI family protein 
Protein accessionYP_002125042 
Protein GI196155553 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAATGG TAATGACGTC TCACGAAATT ATGGGTGACA CCGGCGAGAA AACCGGCATG 
TGGCTAGAAG AGTTCGCTGC GCCATACTAC GCATTTAAAG ATGAGGGATA TACAATCACC 
TTAGCGTCAC CGATGGGCGG CCAGGTACCG ATTGACCCCA ATAGTCTTGC AGACGACGCA 
ATGACGGACG ATTCGATTCG ATACACGAAA GATGAGCTGG CTCGAAGCGC CATAGCGTCT 
ACTATTCCGC TAGAAGATGT ACGTGCAGAT GAGTTTGACG CTGTCTTCTA CCCGGGCGGT 
CATGGTCCGC TATGGGACTT ATCAGATAAT GCGCATTCCA TTAAATTGAT TGAAGACACT 
ATCGCAGCCA ATAAACCCGT TGGGGCTGTG TGCCACGCGC CCATCGTGCT AAAAGATGTT 
AAGACGCCAG ATGGCAAATA TTTGGTTGAT GGCAAGCAGG TTACTGGCTT CTCAAATAGC 
GAAGAAGCTG CGATGGAGCT TACTGACGTA GTCCCTTATC TGGTTGAAGA CGAGCTAGTT 
AAAAAGGGCG GTAAGTATGA AAGCGCGGAT GATTTTGCTG TTAAAGTCTG TACAGATGGA 
TTGTTGGTGA CGGGGCAAAA CCCGCCATCG TCACGTCCTG CAGCCGATGC ATTGATCAAA 
CTTCTATCTT AA
 
Protein sequence
MLMVMTSHEI MGDTGEKTGM WLEEFAAPYY AFKDEGYTIT LASPMGGQVP IDPNSLADDA 
MTDDSIRYTK DELARSAIAS TIPLEDVRAD EFDAVFYPGG HGPLWDLSDN AHSIKLIEDT 
IAANKPVGAV CHAPIVLKDV KTPDGKYLVD GKQVTGFSNS EEAAMELTDV VPYLVEDELV 
KKGGKYESAD DFAVKVCTDG LLVTGQNPPS SRPAADALIK LLS