Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00722 |
Symbol | |
ID | 6777977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 759440 |
End bp | 761281 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642754156 |
Product | Signaling protein with a cAMP-binding, CBS domains and predicted nucleotidyltransferase domain |
Protein accession | YP_002125032 |
Protein GI | 196155543 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCAA TGGCTAAACA AGTGGAAGAC TTCTTAAATA CGTCTGCGCC TTTCGATGTG CTTGATAAAG AACAGAAATT GGAGCTAGTT AAGCACACCG AGCTTATTTA CGTTACTTCC GAGAATGTTA GCGACCTTTA CCAAGAAAAT AACGCACTTT TTCTTATACA AGGTGGGCAG TTCTCTATTC AAGATTCAGA TGCGCCTTTG CGTCATTTAA GTGAAGGCGA CTACTTTGGC TATGCGGGGA TCATGGAGCA GCGCTCCTTC CCGTTAAGTA TCAGTGTAGA CAGCCCTGGG CTCGTTTATC GTTTCGATGC ATCGGCTGTT TCGCCCTTAT TTGAGCAGCC GGCGATACGA CAATTCTTTA ATGGGTTAAG AGACAACGCC CTGCAGAGTC ATGCTATTTC TGATACTAAT TCAATGTGGC TATATAAAGG GCTGTGTGAT GTTATTGAAA AAGCGCCTGT ATCGGTAAAT GCAGATACGT CGATTTCAGC GGCGGCACAG CTAATGACAA CGCAAAAAGT GTCGTCATTG TTGGTAACAC AGAATGACAA GCTTACCGGC ATTGTTACCG ATCGCGACTT GAGATCCCGG GTGGTTGCGG CTTCGTTAGA TACCCATTTG CCGGTAAGTG AAATTATGAC GCAAAGCCCT GCGCAAATAA CTGGAAATAG GACTTTGTTT GATGCGCTAG CACTAATGAC AGAAAAAAAT ATCCATCACC TGCCCGTTAT CGATCATCAG TCACTGGTGC CCTTAGGTAT GGTAACGGCG AGTGATATTA TTCGCCATCA AAGGGGCAAC GTTCTCTTCA TTATTGGCGA GCTTAGTAAA GCTGAAAACT TGTATGAATT GACTCGGCTG TCCTGGCAGC TACCTCACTA CTTTGCTGCT CACGCAAAAA AAGCGGGGGA TTATGATATC GCCGGAAAAA TTTTGTCTCA GGCCACCGAC ATTATGACAA GAAAGTTGAT TGGCTTTTTT CAACAAGCCA ACGGCAAAGC CCCTATGATG TTTGCTTGGC TTGTGTATGG TTCTCAGGCA AGAGAAGATC AAACAATGGG CTCAGATCAA GACAACGGCT TGTTATTGGC AAAGGCCCCG ACTAAAGCGC AGGCTGACTA CTTTTCCAAG ATGTCGGAAT ATGTTTGCAA TGGCCTAGCA AAGTGCGGCA TAAAGTTGTG CGATGGCAAC ATAATGGCCA GTAATCCCGC GCTTCGGCTG TCACTAGACG AGGCCATAGA GGAGGCACGG CACTGGGTAA AGGCACCGAC AAAAGACGCC ATCATGCACT TTAATATCTT TCTTGACGTG CGCTGCGCCG CAGGTGACGT CAGCTTGTTT AAGCAGCTAC AAAAACAGCG CGCTCCTCTT ATGCAACAAA ACATGTTTTT GGCTGCTCTG GCAAGACACA GTAATGAGAT TTCTGTTCCG TTATCGATGT TTCAGAAGTT TATTTATGAA AAAGCGAAAA ACGACAAACA AAAAGAAAAG GATGTCATTG ACCTTAAAAC CCGAGCGGTA GCGTTAATTA ATAATATAGC CCGTATTTAT GCATTGGCGG ACGGGATCAC ACTACCTAAT ACCCTTGCTC GTTTAGACGC ATTATCATCT CGCTCTCAAC TGTCAAAACG AGATGCCACT AATTTGCGCG ACATTTGGCT TTTCTTAAAC AGATTGCGCT GGCGTCATCA GTTGGAAAAT AAAGTGACCG ACAATAGAGT GTCGATATCG AGTCTATCGT CCATAGAAAA ACATCAGCTT AAAGCTGCGT TTAAAGCCAT AGATAGAACC AATCAGGCAA TGGTAATGAA GTTTTCTGGC GGCGTAGGTT AA
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Protein sequence | MTAMAKQVED FLNTSAPFDV LDKEQKLELV KHTELIYVTS ENVSDLYQEN NALFLIQGGQ FSIQDSDAPL RHLSEGDYFG YAGIMEQRSF PLSISVDSPG LVYRFDASAV SPLFEQPAIR QFFNGLRDNA LQSHAISDTN SMWLYKGLCD VIEKAPVSVN ADTSISAAAQ LMTTQKVSSL LVTQNDKLTG IVTDRDLRSR VVAASLDTHL PVSEIMTQSP AQITGNRTLF DALALMTEKN IHHLPVIDHQ SLVPLGMVTA SDIIRHQRGN VLFIIGELSK AENLYELTRL SWQLPHYFAA HAKKAGDYDI AGKILSQATD IMTRKLIGFF QQANGKAPMM FAWLVYGSQA REDQTMGSDQ DNGLLLAKAP TKAQADYFSK MSEYVCNGLA KCGIKLCDGN IMASNPALRL SLDEAIEEAR HWVKAPTKDA IMHFNIFLDV RCAAGDVSLF KQLQKQRAPL MQQNMFLAAL ARHSNEISVP LSMFQKFIYE KAKNDKQKEK DVIDLKTRAV ALINNIARIY ALADGITLPN TLARLDALSS RSQLSKRDAT NLRDIWLFLN RLRWRHQLEN KVTDNRVSIS SLSSIEKHQL KAAFKAIDRT NQAMVMKFSG GVG
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