| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00721 |
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| Symbol | |
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| ID | 6778009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 757630 |
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| End bp | 759336 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642754155 |
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| Product | Na+/solute symporter, Ssf family protein |
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| Protein accession | YP_002125031 |
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| Protein GI | 196155542 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTTC AAACTTTAAC ATTTATTATT GTTGGCGCTT CTTTTGCGCT TTACATTGCA
ATTGCAATTT GGGCTCGCGC TGGGTCTACT AACGACTTTT ACGTTGCTGG TGGCGGCGTG
CCACCTGTGA TGAACGGTAT GGCTACCGCA GCAGATTGGA TGTCGGCAGC GTCTTTCATC
TCTATGGCTG GGCTTATCTC ATTTATGGGC TATGACGGCG CCGTCTACCT TATGGGCTGG
ACCGGCGGTT ATGTATTGTT AGCACTCTGT TTAGCACCTT ATTTACGTAA GTTCGGCAAA
TTTACGGTGC CTGATTTCAT CGGTGATCGT TACTACTCTC AAACGGCACG TACGGTGGCT
GTATTCTGCG CAATCTTTGT TTGTTTCACA TACGTGGCAG GCCAAATGCG TGGGGTCGGT
GTGGTATTTA GCCGTTTCTT AGAAGTAGAC ATCGTATCTG GTGTGGTTAT CGGTATGGTT
ATCGTGTTCT TTTACACCGT ATTGGGCGGC ATGAAAGGCA TTACCTATAC TCAGGTAGCA
CAGTACTGCG TAATGATATT CGCTTACATT GTACCAGCGG TATTTATCTC TATGATGGTG
ACAGGCCACA TCCTGCCGCA AACAGGGTTC GGTGCCACAC TTGCTGACGG CTCCGGCGTC
CATATGCTGC AAAAGCTCGA TAATTTATCC GTCGAACTTG GGTTTAATGA ATACACATCC
GGTACCAAAA GTACCATAGA CGTATTCTTT ATTACCTTTG CACTTATGGT GGGTACAGCG
GGTCTTCCAC ACGTTATCGT TCGTTTCTTC ACTGTGCCTA AAGTTCATGA TGCACGTAAA
TCAGCAGGTT ATGCATTGGC GTTCATTGCT ATCTTGTATA CCACTGCTCC TTCGCTAGCG
GCATTCGCTC GGGTCAATAT GATTGAAACC ATTAATGGCC CTGAAATGAC AGGAACCAGC
TACGCAGAAG CGCCGTCTTG GATTAAAAAC TGGGAACAGA CTGGGCTAAT CGCCTTTGAA
GATAAAAACG GCGATGGCAA GATGTTCTAT TCGGGTGATG AGCGCAACGA AATGAAAGTT
GACCGCGACA TCATGGTATT GGCAAACCCT GAAATTGCAA ACCTACCAGC ATGGGTAATT
GCGTTGGTTG CAGCGGGGGG AGTGGCAGCA GCCCTTTCTA CATCGGCAGG CTTGCTGTTG
GTAATTTCCA CCTCTGTATC TCACGATTTG TTGAAGCGAA ACTTCATGCC AAATATTACC
GATAAAGCCG AGCTTATGTA TGCGAGGTTA GCTGCGGGGG TGGCAATTGT TATCGCGGGC
TACTTCGGTA TTAATCCGCC CGGCTTTGTG GCTCAGGTGG TCGCCTTTGC CTTCGGCTTG
GCTGCGTCGA GTTTCTTCCC CGCTATCATC ATGGGTATAT TCAGCAAACG CATGAATGAT
AAAGGGGCCA TTGCAGGCAT GATTTCAGGT ATTGCCTTTA CTGCGGCTTA CATCATTTAC
TTCAAGTTTG TAAACCCAGC AGCCAATACG CCTGATAACT GGTGGTTCGG TATTTCGCCA
GAGGGCATTG GCACGGTAGG TATGCTGGTG AACTTCATTG TGGCGTTCCT AGTGTTTAAA
GCAACCGATG AAGCACCTGA AGAAATCCAA GAGCTGGTTG AAAGCATTCG TTACCCGAAA
GGTGCGGGCG AAGCGTCAGC TCACTAA
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| Protein sequence | MDVQTLTFII VGASFALYIA IAIWARAGST NDFYVAGGGV PPVMNGMATA ADWMSAASFI
SMAGLISFMG YDGAVYLMGW TGGYVLLALC LAPYLRKFGK FTVPDFIGDR YYSQTARTVA
VFCAIFVCFT YVAGQMRGVG VVFSRFLEVD IVSGVVIGMV IVFFYTVLGG MKGITYTQVA
QYCVMIFAYI VPAVFISMMV TGHILPQTGF GATLADGSGV HMLQKLDNLS VELGFNEYTS
GTKSTIDVFF ITFALMVGTA GLPHVIVRFF TVPKVHDARK SAGYALAFIA ILYTTAPSLA
AFARVNMIET INGPEMTGTS YAEAPSWIKN WEQTGLIAFE DKNGDGKMFY SGDERNEMKV
DRDIMVLANP EIANLPAWVI ALVAAGGVAA ALSTSAGLLL VISTSVSHDL LKRNFMPNIT
DKAELMYARL AAGVAIVIAG YFGINPPGFV AQVVAFAFGL AASSFFPAII MGIFSKRMND
KGAIAGMISG IAFTAAYIIY FKFVNPAANT PDNWWFGISP EGIGTVGMLV NFIVAFLVFK
ATDEAPEEIQ ELVESIRYPK GAGEASAH
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