| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00719 |
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| Symbol | |
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| ID | 6778087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 753659 |
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| End bp | 757102 |
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| Gene Length | 3444 bp |
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| Protein Length | 1147 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642754153 |
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| Product | Multidomain protein contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domain |
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| Protein accession | YP_002125029 |
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| Protein GI | 196155540 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTTTG GTTGGGTAAC GCTTGCAGTT CTGTATCTCT TCTTACTATT TTCATTAGCG
AGTTGGGGCG AAAAGAATTC ACCTACTGCC CGCGCACTCA CCTCTCACCC GGCTATTTAT
TCACTCGCGC TCGCTATTTA CTGTACGGCT TGGACGTTCT TTGGAATGGT AGGCCAAGCA
AGTCGAGACA CATGGATTTA CCTTCCCATT ATGCTTGGTC CCATTTTGGT TTATGTATTG
GGGTATAAGT TTATTTATAA GCTGACCTTG GTGAGTAAAA AGCAACATAT CACCACCATC
TCAGACTTTA TTGCTTCACG TTATGGGAAG CGCCAAACCG TTGCGTTAGT AGTAACACTT
ATTGCTTTAT TGGCCACCAT TCCCTATATC GCACTTCAGT TGAAGGCCGT TGGGGCGACT
TTCCAGTTGT TAACGCAACA ACCAAACAGC AACGGCATTA TTATTGCCGC CACCGGCTTC
ATTGCCGCTT TTGCTATTTA CTTTGGCACA CGCCAAACCG ATGTCACTGA ATACCGCCGG
GGCTTGATGT TAGCCATAGC ATTCGAATCG ACCATCAAAT TACTGGCTTT GGTGCTAGTG
GCTGCGGTTG GGTATAGTGC ATGGAAACGA ACCCAGTCAG GGCCGTTTTT TGAAAGTTTT
ACTAATGAAA TCGCCCTCTC TCAGTTTGGC TCGTTCAGCT TTATTGCACA AACGATCATG
GCTGCCGCTG CAATAGTGTG TTTACCCCGC CAGTTCCACG TTGCCATTAT CGACAATTTA
AGCCTTGGGC ATTTGCGCAC TGCGCGTTGG CTCTTTCCCT TATACCTTAC TGTTATTTCC
GCCGTGATCC CGATAATTGC TATCGCGGGC AAAGCGATCT TCGCCAACCA AGGCATAGAG
CCCGACTCTT ACGTGTTATC ACTGGCCGTA TTTTCCGAGT CGGTACTGCT TCAGGTTATT
GTATTTGTGG GCGGGTTGTC CGCGGCAACG GCGATGATCA TTGTCGCTAC GCTAACCCTT
AGCACTATGT TAACTAACGA TGTTATTTTA CCTCGCATAT TAGCGTTTAC GGGCAACACA
GATGACAAAA AGGACGTATC GAGAAAGATT CGTTTAATTC GCCGTATTGT TATAGCGTTT
ATTCTACTTA TGGCGTTTTT ATACCACCAG CAAATGACCA GCAGCCGCTC TCTTCACTCT
ATCGGCTTAA TTGCCTTCTC GCTGGTTATT CAGCTAATGC CTGCCATTGT GGGCGGGCTG
TATTGGAAGC GGGCTCATGC ACACGGGGTA TATGCAGGCC TAATGGTAGG CTTAGTTATT
TGGGTGCTGT GGCTAGTGCT TCCCATTGTG AGCGAGCAAG TATCGCAAAT GGAGCAAAAC
GAGTTAATCA GCCAAGGCGC CATGATTAGC TTGGCGGCAA ATAGCTTTGT GTACATTTTA
TTTTCTCACT TCGCGCCCCA GCGTCTTATC GATCGCATTC AAGCCGAAGC CTTTGTATCT
CCCGCTATAT CCAGCAGTAA CACAGTAAAA ACCCAGGCAA CGAACGTAAC AGTATCAGAC
CTTATTACTT TACTTTCTAC CTTCATGGGA TCTGGTCGGT GTGAGCAGTT GCTAGACCAA
TACCAGCACC TTAATAACTG TCAATTGAAG CATGACGACA CGCCTAATGA ATCCTTTTTA
TCCTTCTGCG AGCGTGCATT AGGTGGTGTT ATTGGCGCAT CGAGCGCAAA AGTGCTGCTA
GACAGCGCGT TACGTGGTAA AAAAATGGAC TTCACTGAGG TTATCAACTT CTTTGATGAC
ACCACGCAGG CGATGCAATT TAATATGACC GCGCTTTTAA CGTCGCTTGA AAACATGGAT
CAAGGAATCA GCGTTGTCGA CAAGCATTTA AACTTAGTAG CGTGGAACAA GCGCTACGCT
AATCTCTACC CTTACCCCGA CAACTTACTT GCGGTGGGTA CCCCGATAGA AAAGCTCATT
CGATACAATG CCGCTCAGGG TGAATTTGGT ACAGATAACG TAGATAGCGA AGTTGAAAAA
CGTCTCTCAC ATTTGCGCTC GGGCATGCCT CACCGCTTTA CCCGCCAGCG CAAAGATGGC
CGAGTTATTG AAATGGTCGG CAACCCGCTA CCTGGTGGCG GCTTCGTAAC AAGTTTCAAC
GACATAACAG GGCATGTGGA AATTCAGCAG GCTCTAGAAG AGTCGAATAT AGATCTTGAA
GCGCGAATTA AAAAGCGTAC TGAAGAAGTG CATTCAATTA ACGCCGAGTT ACGTCTTGAA
ATTGAACGTC GCTCTGAAGC AGAAAAAGAG CTGATAAGAG CAAGAAAAGC GGCCGAAGAT
GCTAACGCCA GTAAAACCCG GTTCTTGGCG CTCGCCAGTC ACGACGTTCT GCAGCCGTTG
AACGCGGCAA AGCTTTATGT CAGTGCGCTA GAAGAGCAAG AGCTACCCGA ATCGTCCCAC
GCCATTATTC AGAAACTTGG ACACAGCGTT ACGTCGAGCG AAACACTGAT TGGTACACTG
TTAGATATTG CACGTTTAGA TCAGGGCGAG ATGAAACCGG ATATTGAATC TATTGATATT
ACGGCACTAC TTTCCCCGCT GATAGACGAA ATGGCCATGC GAGCCAAAGA AAAAGGCTTG
GGCTTTAAAG CCATTATGCG TCCCTGCTGG GTTAGAGCAG ACAAAACCTA TTTGTATCGA
ATAACTCAAA ATTTGCTATC AAATGCTGTG AAATACACTG AAAAGGGGCG CGTTTTATTT
ATTGTAAAAC CAATAAAAAA CACCGTTCAT TTTAAAATTC TCGATACGGG CATAGGTATA
TCTGCCGATA AAAAAGACAG TATCTTCGGC GACTTTTTCC GTGCAAACGA GAGTAAAGAG
CACGGCTTGG GGCTGGGCTT AGGGGTAGTA AGGCGCCTAA GCCTTCAACT AAACAGCGAT
ATCCAAGTCA TGTCACAAAT AGGGAAAGGC AGTTGTTTTA CGTTTACGCT CGAGAAAGCC
GAACCCAAAC GGGTATCGAG TATTGTATCG AAACCTCGCG GCACCACCTT CACGGGTATG
GACGTTCTGT GTGTGGACGA TCAAAAAGAA AACCTTGATG CCATGAAAAC CCTTTTGCAA
AAGTGGGGGA TTAACGTTGC CCTTGCCAAC AACTGGGATG ATGCACTAAC CCTGTGTAAG
ACAATTCAGC CGCAAATTCT GTTAATGGAT TATCAGCTTA GCCACGACAG CGAGAAAAAC
GGATTAGCGC TGATAGAGGA AATTAGGCAC AGGCTTAACA TTGTGGTGCC AGCCGCTTTG
ATAACCGCAA CCCCCGATGA GAGCTTGGTC ACACAATGTA AAGCGCAGGG CGTAAACTTT
TTGGCAAAGC CACTTAAACC CGCCAAACTC CGTGCCCTTC TTCAAAGTAT GACGCGCTAT
ATTAGGGAAG CAAAAAACGT TTAG
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| Protein sequence | MVFGWVTLAV LYLFLLFSLA SWGEKNSPTA RALTSHPAIY SLALAIYCTA WTFFGMVGQA
SRDTWIYLPI MLGPILVYVL GYKFIYKLTL VSKKQHITTI SDFIASRYGK RQTVALVVTL
IALLATIPYI ALQLKAVGAT FQLLTQQPNS NGIIIAATGF IAAFAIYFGT RQTDVTEYRR
GLMLAIAFES TIKLLALVLV AAVGYSAWKR TQSGPFFESF TNEIALSQFG SFSFIAQTIM
AAAAIVCLPR QFHVAIIDNL SLGHLRTARW LFPLYLTVIS AVIPIIAIAG KAIFANQGIE
PDSYVLSLAV FSESVLLQVI VFVGGLSAAT AMIIVATLTL STMLTNDVIL PRILAFTGNT
DDKKDVSRKI RLIRRIVIAF ILLMAFLYHQ QMTSSRSLHS IGLIAFSLVI QLMPAIVGGL
YWKRAHAHGV YAGLMVGLVI WVLWLVLPIV SEQVSQMEQN ELISQGAMIS LAANSFVYIL
FSHFAPQRLI DRIQAEAFVS PAISSSNTVK TQATNVTVSD LITLLSTFMG SGRCEQLLDQ
YQHLNNCQLK HDDTPNESFL SFCERALGGV IGASSAKVLL DSALRGKKMD FTEVINFFDD
TTQAMQFNMT ALLTSLENMD QGISVVDKHL NLVAWNKRYA NLYPYPDNLL AVGTPIEKLI
RYNAAQGEFG TDNVDSEVEK RLSHLRSGMP HRFTRQRKDG RVIEMVGNPL PGGGFVTSFN
DITGHVEIQQ ALEESNIDLE ARIKKRTEEV HSINAELRLE IERRSEAEKE LIRARKAAED
ANASKTRFLA LASHDVLQPL NAAKLYVSAL EEQELPESSH AIIQKLGHSV TSSETLIGTL
LDIARLDQGE MKPDIESIDI TALLSPLIDE MAMRAKEKGL GFKAIMRPCW VRADKTYLYR
ITQNLLSNAV KYTEKGRVLF IVKPIKNTVH FKILDTGIGI SADKKDSIFG DFFRANESKE
HGLGLGLGVV RRLSLQLNSD IQVMSQIGKG SCFTFTLEKA EPKRVSSIVS KPRGTTFTGM
DVLCVDDQKE NLDAMKTLLQ KWGINVALAN NWDDALTLCK TIQPQILLMD YQLSHDSEKN
GLALIEEIRH RLNIVVPAAL ITATPDESLV TQCKAQGVNF LAKPLKPAKL RALLQSMTRY
IREAKNV
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